Gene detail

Detailed information of Bpl_scaf_57519-2.16 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_57519-2.16	PROTEIN PHOSPHATASE	Bpl_scaf_57519	214054	231301	+

Gene Structure

More details in Jbrowse Sequence

CDS

Bpl_scaf_57519-2.16

ATGTCAACGGAAGTACAACCAACCAATCAAATTGAATCTTTAGAATACATTGTAATTTCCCCTCCATGTCGAAGTTGGGACAAATTTTCAAACAAAATGTCAAGTTACAAAATTGGGGTGAATTTAAGAGTGACAGAAAATAGTAACCAAGGTGGTCGGAAGTACATGGAAGATACACATGCAATACGATTTGTTAAAAACGACGAAGGCGGTTTTGAATTCGCCTATTTTGGCATTTTCGATGGACATGGTGGTGGCGAGGCTTCGAAATTTGCCCGTGATCACCTTCTAGATGAAATAACAAAATATGAATGTTTTTGGAATGATAATGATGACGATGTCTTGCATGCTATAAAATCAGGTTTTCTAGACGTCCACTTCGCAATGTGGAGGGAAGTAGACCAATGGCCAAAGACTTCCAGTGGTTTTCGAAGTACATCTGGAACTACAGCAAGTGTTGCTATAATTAAAAACTCGAAGCTTTATATTGGACATGTTGGTGACTCTGGAATAGCCCTCGGCTATGACGATAGTGGATGTGACAAGTTCATACGACCTAAGGGCACGATGTTAACTATTGATCACAAGCCAGATAGTCCAGAGGAGAAAAAAAGGATAGAAGAATGTGGAGGCCAGGTTGTAGCCAAGTCAGGGGTCCAAAGAGTTGTATGGAATAGACCTCGAAATCAACATCAGGGTCCAATTAGAAGAAGTACCCCTATAGACAGAATCCCATTCCTAGCTGTCGCCAGGAGTTTAGGTGATCTTTGGAGCTACAATTATCTAAATGAACAATTTGTAGTATCACCAGAACCAGATGTATCGGTGAGGAAGTTGGATCCGACTCGAGACAAATGTTTGGTTCTAGGATCTGATGGTTTATGGAACATGGTATCTGCCGAGGAATCTGTATCTGTTGTAGTTGATCTGGAGTATCACTTTGAATACAAAGTTATAAATGATCCAACAGCTCCTGTGTCCTATTGGATAAATCCTGCAGAAAAACTAGTGCAAAGAGCCCTGAATAAATGGAGGTCACGTCTAATGAGAGCAGACAATACCAGCTGTGTAGTTGTTTTAATTGATCCTCTGGGACCGAGAAAGCTTTCACTACTTAAAAAGGAAAGGGAAGAAAATTTACGTAAAATAAGAGAAAACAAAGAAAAATTTGAAAAAGCCAGCAAAATGGCTACTCGTTCCTCGCCAAGGAAATCATTAGAAACCGATTCAGAAATAATTTCTTTGAAAAATGAAATCAAAAAGCCTTCACCAAAAAGTGCACCTTGTAGTCCCAAAAAATTGAATGACAATTGTCACAAAGGTGTTGTATCACCAGTTTCTTCCGAGAAAACAAGGAGAATGTCGGTTCCAAATTCCATGGAATTTGATCTAGATGACAGTATTCAAGCTGCCAATATTAACAAGAAATTAAATTTTACACCAAGCACTGTTAGAGAAAAGATGACTCGAGCAGTAGATATATCTGATCAAATTTTAGCTCAAGGTAGTGCATCAGCATTGAAGAAAGCCACTGAAATCTTGTCGCACGGACAGAAAAATATTTCGTCCAAGAAAGTCGAAGATCATCCATGTCCAGAGAGTGCCTCCTCTATGAAGAAAGCTAATCGAACAAATTCAAAACAGAACGATCAGCATCAAGGGAGTGTTTCCGTTTTAGATAGCAATTGTCATTTCACACGGACTCGACAAAGACATTCTTCTGATGCCATTCTGACGTTAAATAATCGTCAATCAAATCCTTTGACTTTCTTGAAAGGTTTTATGGGTAAATCAATGACAGAAAATAAGACTGAATCTCAATGTAGAAATGTCCTCACTGAAAGTTCAAAACAGACAAATAAAGTTAATTCCCATGATCAATCTAAAACCAAAGGGAAGGCTGATATTCATTTGAAAGATGATCAAAATATTTGTGATTCTGCTGCATTTAAAGTTCGAACAAAGGAAGAAATTAATGAAAGGTTAGGCCATGGACATCAATTACGGAATGTGAAGAAGAATGACAGCAAACCGACTTCTCTTGTATTACGTAGACTTTCGACAGACACTAGTAAAAATACTACACGATCAAGCATGAGACTACGAAAAATCCATCCAAGGGCTTTGAAGTGTAAAAATCAAACTGAAAACAAGAGTTTTGTATCAAAATTAAAATTCAGTGCATTGAAGCGCAAGAGAACATGTTCAGAAGGGGCACCTGCTTCCAAGAAAGTGTGTCGTAGTTAG

Transcript

Bpl_scaf_57519-2.16

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00481	PP2C	Protein phosphatase 2C	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000222	Binding_site	PPM-type phosphatase, divalent cation binding	Interproscan
IPR001932	Domain	PPM-type phosphatase-like domain	Interproscan
IPR015655	Family	Protein phosphatase 2C	Interproscan
IPR036457	Homologous_superfamily	PPM-type phosphatase-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47992	PROTEIN PHOSPHATASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004722	Molecular Function	protein serine/threonine phosphatase activity	Interproscan
GO:0006470	Biological Process	protein dephosphorylation	Interproscan
GO:0035970	Biological Process	peptidyl-threonine dephosphorylation	Interproscan
GO:0043169	Molecular Function	cation binding	Interproscan
GO:0045814	Biological Process	negative regulation of gene expression, epigenetic	Interproscan
GO:0051019	Molecular Function	mitogen-activated protein kinase binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K10147	PPM1D, WIP1; protein phosphatase 1D	EC:3.1.3.16	p53 signaling pathway	ko04115	PMID: 28812709

Expression pattern

1. Expression trend for Bpl_scaf_57519-2.16 global RNA-seq network