Gene detail

Detailed information of Bpl_scaf_57332-6.10 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_57332-6.10	PARP/ZINC FINGER CCCH TYPE DOMAIN CONTAINING PROTEIN	Bpl_scaf_57332	743713	756640	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

Bpl_scaf_57332-6.10

CAGATTCTGATTACCCTTTGGTATCTTTTGTCCATTGTGTTGTCTGTTCTTCTTTGATATACAGATTCTGATTACCCTTTGGTATCTTTTGTCCATTGTGTTGTCTGTTCTTCTTTGATATACAGATTCTGATTACCCTTTGGTATCTTTTGTCCATTGTGTTGTCTGTTCTTCTTTGATATACAGATTCTGATTACCCCTTTGGTATCTTTTGTCCATTGTGTTGTCTGTTCTTCTTTGATATACAGATTCTGATTACCCTTTGGTATCTTCAAACTCTTCTTGATAAATTCTCAATGAAATGAAATGCTAAATCTATTGATACATTTTGTTTTTCAGGAAGGTAAAATAATGAAACTGAAAGATACCTGTGAGGTTGACATTGAACTTCATAAAAGACTTGGTCGAATAATGATTAGAGGTCTCCCTGAAAATTTATCAGAAGCAGTCGATCATGTTCACAAAATTATACGTGATGTCGACAGACAAAAGCAGAAACACGAACATGCCCAGTTAGTAAAAGATATGGTTCAATGGTATTTTATTTCTGTGGAAGCTACAGGGCAGAAATTAGAGGAATACCCACCAGAGGTCAATCTAACATTAGAGCAGGCATTAAAGAACAATGAACCACAAGCATTCTTTTTAGACAACAGTGGCAATAAATATATTGTAGACTTTACAACTTATGAAGAATTTCCAGAAGATGACCCCAATGATACTGTAGCAGTTCTACGTAAATCCAAGATGACTGATTCTGCATTTGACATGCCATCAAATTGGACACCTATGGATGACAGTGAAAATGTAAAAATAGTCACACTTCAGCCCAGTGATCAGGAATATGCTGATGTTATCAAAGATTTCCAGACCCAGATGGGAGCTAATTACAATACCATTTTAAAGGTTGAAAAAATACAGAACAGAACATTACAGCAGCAATATGTTTCCAAGAAAAAATTAATGGATTCAACAAATCTAGCTGGACATAATAATGAACGTAGATTATGGCATGGTACAGCAATAGATGCTGTAGATAGTATCAACACTTATGGTTTTAATAGAAGTTATTGTGGCAAAAATGCTGTTGTGTATGGTAATGGTGTCTATTTTGCTGTAAATCCTACATATTCGGCACAGTCTCAATATGCTCGACCAGATCCAAATGGCAACAAAAGGATGTATATTTGTAAAGTTCTGGTCGGGGAATTCACAAAAGGCCAGAATGGCATGAAAGTACCTCCACAAAAACCAGGAGCTGCTGGTTCCCATATTTTATATGATAGTGTTGTAGATAATCCAGCAGCACCAGGAATATTTGTCATATTCCATGATACCCAAGCTTATCCAGAATATCTTATTGTATTTCAGTGAACCAAGTTTACTGTCAGATTTGAAACATTGTTTACCTGTATTATTGTGACATACATACATGTACAAAAATGTATATTGTATTCAAATTGTAATTTTGTGCAAAAAACAAAGGAAAAATTGGTGTAGTATTTAGCTCATTTGACCATTTGGCTCATGTGAGCTATGCTCACATTTCCTCAAAGTAACTAAGCCTTTCAATGTGTTTTAATGGAATTGAAAGTATATAATACATAGATTATGATATAGCAATGTTCAGATCACACTCCATATCAACCTGAGACACTCATATTAACCAGAGAAACCCAGAAATATATATATATATTCTAGTAAGCCAGAGGGCCTTTTCATATCACACCCCTTATATAGAATCGACTTCACAAAACTTTGCAAAATCCAACACGTTATTTCCAGATAAATGTGTGTAAAGTTAAGCTCTGTCCAAAGTCGATTCTATATTTCTATACATTTATAGTAGTTAAAATGGTGGAATTAAGAACAATAAATATTTATCCCATTTAAGGATACAAAGATAAATATTCAGAGATAATTAACTATGAAGCTTATAGAAAAATATTTATTATACTCCCCCGCAACGAAGTTGTAGGGGGGTATACTGGTTTCACCATGTCCGTCTGTAGATAAATCCTATGTCGTACGATAACTTGAGTTGTGTTTCTTAGAATCTTTTAAAATGTTATCAGCTGTTTACTGGTGAAGAGAGGAGGATCCCTTTCATTTTTGACCATTTTCACTTTTGCCGTTTCAGAGTTGTTGGACTTAATATGACGGAAAATAGGATTTTTACCCTATGTCGTATGATAACTTGTGTAGTGTTTGTTTCTCAGAATGTTTTGAAATTTTATGAGCAGTTTACCGGTGAAGAGAGGATACCTTTCATTTTTGACGATTTTCACTTTTGCCGTTCCAGAGTTATTGGACTTGACATGACGGAAAATAGGATTTTTACCCTATGTCGTATGATAACTTGAGTAGTGTTTCTTAGAATCTTTTAAAATTTTATCAGCTGTTTACTGGTGAAGAGAGGAGGATCCCTTTCATTTTTGACGATTTTCACTTTTGCCGTTCCAGAGTTATTGGACTTGATATGACAGAAAATAGGATGTTTACCCTATGTCGTATGATCACTTGTGTAGAGTTTCTCAGAATGTTTTGAAATTTTATCAGCAGCTTACCGGTGAAGAGAGGAGGATCCCTTTCATTTTTGACAATTTTCACTTTTGCCATTCCAGAGTTATTGGACTTGATATGATGGAAGAGAGGAGTTTTACCCTATGTTGTATGATAACTTGAGTAGTGTTTCTCAGAATGTTTTGAAATTTTATCAGCAGCTTACCTGTGAAGAGAGGAGGATCCCTTTGGTCGGAACAATCAGTAATGTTTTGGTTATGGAAATAGGTTGGACAGATGTGGGGAGCGGGGGGTATATCTTAGCTATAGTGAGCTGTGCTCACAGTAATACTAGTTTAACCAATTGGTATCAATGTATTTTATTAGACAAACTCCACAAATCGGGAAATATAGTACCCAGAAGATCAGATCTCAGTTATAGTCTGGATTCAACAAGTTTACAAATGGGTGGAGTATGTTGCTCTATTGTCACCGAAAAAAAAAATGGAATACAGAAATGTTTTGGGAGATGGCTTAATCATAATGAACATCTTCTTATTGATTATTTGTTAATATATAAAATGTATATAAATATATCTAAAAACTTATTCCTAACTTTTTATGCTTAAATTTTTTGTATCTTTCTTTTTTTTTTTGTAATCCATCA

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00644	PARP	Poly(ADP-ribose) polymerase catalytic domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR004170	Domain	WWE domain	Interproscan
IPR012317	Domain	Poly(ADP-ribose) polymerase, catalytic domain	Interproscan
IPR037197	Homologous_superfamily	WWE domain superfamily	Interproscan
IPR052056	Family	Mono-ADP-ribosyltransferase ARTD/PARP	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14453	PARP/ZINC FINGER CCCH TYPE DOMAIN CONTAINING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003714	Molecular Function	transcription corepressor activity	Interproscan
GO:0003950	Molecular Function	NAD+-protein poly-ADP-ribosyltransferase activity	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0010629	Biological Process	negative regulation of gene expression	Interproscan
GO:0070212	Biological Process	protein poly-ADP-ribosylation	Interproscan
GO:0140289	Biological Process	obsolete protein mono-ADP-ribosylation	Interproscan
GO:1990404	Molecular Function	NAD+-protein ADP-ribosyltransferase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K15261	PARP10_14_15; poly [ADP-ribose] polymerase 10/14/15	EC:2.4.2.30	Non-coding RNAs	ko03100	PMID: 28812709

Expression pattern

1. Expression trend for Bpl_scaf_57332-6.10 global RNA-seq network