Gene detail

Detailed information of Bpl_scaf_56904-3.8 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_56904-3.8	ORGANIC ANION TRANSPORTER	Bpl_scaf_56904	277545	296518	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

Bpl_scaf_56904-3.8

ATTTATAATGTTCATTTATTTAGTCATAAAATTGGGAAAAAATATAGTAATCAACTGTTTACAACAGGACGACACAACACAAATATGACATGACCCTTAAACCCTCTAACCTCTTGAACCTTGCCACCTCTACATACAAAATACCAACAAGGCTGATGCATCAATTTAGAATCTTTGCAATTGTAAGATATTAAAATAGTTATTTTCATTACATTTATCTACATACGACAAGAATGAGCTATCATGGTAAAAACCATCATGTTTCAGATGTTTACAAGGCCTCAACAGGATGTCTTTATTTACACTGTTCGTGAGTATTATGTGTTTCGTGGAAGGATTTGCTGTAAATGGAATAGCCAATGCTGCACTACCGGCTCTAGAACGACAATTCAAACTACCATCCACTAGATCGGCTATTATACCAAGTTCACAAGACATTGGAGCTCTAATAGTTGTGTTGTTTGTCAGCTTTATTGGTGGGCGTTATAATAAAGCATCGTGGGTAGCTACGGGGTCGATTATCATGGCTATAGGGTCATTCTTATTCATGGTTCCGCATTTTGCAGAAAGATACGTTTATCCAGAGTCTACGACCGAGTCTACCTACAATTGTACAGGGAGTGCGATGCCATCTACAGCATGTGATACTGGAGGCGATAAATATCTAGTAGTGTTTATCATTGCTCAAATAGTGCATGGAATCGGCTTCTCTCCAATGTTTACTCTCGGTACAGCATACATTGACGAAAATGAAGATCACTCAGTGGCTGCTGTGTACGTTGGATTTACCTATGCCGTTACAGCCATAGGTGTTGCTGCAGGATTTTTTACTGGTGGCAGGTTTGGTCAAAGTTACTTTGTTGATTTTGACAAGGTAGACCAAGATAGTTTAGGGTTCGATGCAACAGACCGTCGATGGATAGGAGCTTGGTGGTTAGGATTTGTCATAGCTGTAGCAGGATTTCTTATTATAGCTATTCCTTTGTTTGGATATCCCAAATTCTTACCATCAACAGATAAATACAGACAACAGATATCAGGTGGCACGGAGAAATCTTCATTAGGTCAAATGTTTAAGCAGTTTTTCATTGCTTTGCTGGAATTGATCAAAAATCCCGTATTTATGATGCTGGCTTTTGCTGCAAGTGCAAACACGCTGATTATATCTGGTGTTGGAGCGTTTTCTTTTAAGTTTTTGATGGAACAATATAATCTTGATATTGATTCAACTGGATATCTAATAGGTGGCTTGATATTAATAGGCTCTGTGGGAATGTTTAGTGGTGGATTATTTATCAGAATATTCCACATACAAGTAAAGGGAATGTTGGTTATGTGTTTTGTATCTGGGTTCTTATCCGCTGTCATTGGAATAAGTTTCATAGCAGGATGTCCAGAGGTTCCACTAGCTGGTCTAGAGGTTCCTTACAATAATAAACTGAATACATCAACTGGTTACCTGGATACTTGTCAAGGTGTGTGTCAGTGTCAGCATGAAGGATTATCATTGGTTTGTGGGAAGGACAACATTGTATACTACTCTCCTTGTCATGCTGGGTGTTCATCACAATCAGGCCCGATGACATATCACAACTGTAGCTGTGTAGCATCTAGTTTAAATGTACAAACAAATCACGCTGACGCCATGGTGAGCGCGGGAAGATGTGACGACGGTTGTACAAAGCTTTATATTTTAGCGCCATGTATGTTCATATCTATGATTTTAGTGTTGAATACCGTCACTCCTAATTCAATGGCTTTATTGAGGGTTGTCAAAGATGAACATAGACCATTTGCATTAGGTGTGCAATGGATATTTATAAGACTATCAGGAACCATTCCAGGGCCGTTTTTAGTAGGTTGGGCTATAGACAACTCATGTTTAATTTTCTTAGATGGATCTTGTGGTAATAAAGGAAATTGTTTGTTATACAGCCACGACAAGATGGCGATGGGAGTTATGTTATGGTGGCTAATCGTATCCATGGTTTCAGCCATATTTTATTTAATAGCTTTAATAATACATCAATGTTGTGGACAGAAGAAATCCTTTGATTTAAAGATAACTACTTGATGTAGACATTGATTTTATACCATTATTTTTATTTTCATGAAATGCCTTTTAGAAGTATAAAATATTGTCATTTATTCATATCATATTCATATTATGTACAAGTTTTGAAAC

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03137	OATP	Organic Anion Transporter Polypeptide (OATP) family	Family	Interproscan
PF07648	Kazal_2	Kazal-type serine protease inhibitor domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002350	Domain	Kazal domain	Interproscan
IPR004156	Family	Organic anion transporter polypeptide	Interproscan
IPR036058	Homologous_superfamily	Kazal domain superfamily	Interproscan
IPR036259	Homologous_superfamily	MFS transporter superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11388	ORGANIC ANION TRANSPORTER	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005887	Cellular Component	plasma membrane	Interproscan
GO:0015347	Molecular Function	sodium-independent organic anion transmembrane transporter activity	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0043252	Biological Process	sodium-independent organic anion transport	Interproscan
GO:0055085	Biological Process	transmembrane transport	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K14354	SLCO4A; solute carrier organic anion transporter family, member 4A	-	Transporters	ko02000	PMID: 28812709

Expression pattern

1. Expression trend for Bpl_scaf_56904-3.8 global RNA-seq network