Detailed information of Bpl_scaf_56025-0.15 in Gigantidas platifrons Gene info
Gene IDAnnotationScaffoldStartEndStrand
Bpl_scaf_56025-0.15E3 UBIQUITIN-PROTEIN LIGASE RNF180Bpl_scaf_560257276781328-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
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InterPro
InterPro termTypeDescriptionSource
IPR001841DomainZinc finger, RING-typeInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR017907Conserved_siteZinc finger, RING-type, conserved siteInterproscan
IPR033263FamilyE3 ubiquitin-protein ligase RNF180Interproscan

PANTHER
PANTHER termDescriptionSource
PTHR46717E3 UBIQUITIN-PROTEIN LIGASE RNF180Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000209Biological Processprotein polyubiquitinationInterproscan
GO:0031227Cellular Componentobsolete intrinsic component of endoplasmic reticulum membraneInterproscan
GO:0031624Molecular Functionubiquitin conjugating enzyme bindingInterproscan
GO:0032436Biological Processpositive regulation of proteasomal ubiquitin-dependent protein catabolic processInterproscan
GO:0042415Biological Processnorepinephrine metabolic processInterproscan
GO:0042428Biological Processserotonin metabolic processInterproscan
GO:0061630Molecular Functionubiquitin protein ligase activityInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K15708RNF180; E3 ubiquitin-protein ligase RNF180EC:2.3.2.27
Ubiquitin systemko04121PMID: 28812709

Expression pattern
 1. Expression trend for Bpl_scaf_56025-0.15 global RNA-seq network
TOP