Gene detail

Detailed information of Bpl_scaf_55634-4.8 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_55634-4.8	SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-RELATED	Bpl_scaf_55634	375180	395635	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

Bpl_scaf_55634-4.8

CGATACTGGTTTTCGGGTTTTTTTCGACAAAGGATGAGCTAGCATGAACAGCGGAAGAGGATAATCGCTCAAAATAAACAAAATGTCTGACATGGACAAATGGATAGAAATTGCAAAAGAATGCAAATATTTACCAGAAAATGACCTCAAAAGATTATGTGATATGGTGTGTGAATTACTCCTAGAAGAATCCAACGTACAGCCAGTGTCCACTCCAGTTACTGTATGTGGGGACATACATGGACAATTTTATGACTTGATAGAATTGTTCAAGACTGGTGGACAAGCTCCAGACACAAACTATATATTTATGGGAGACTTTGTTGATCGGGGATACTACAGTTTAGAAACTTTTACCTTATTACTCACATTAAAGGCTCACTGGCCAGACAAAATAACATTATTACGTGGTAACCATGAGAGTAGACAGATCACACAGATTTATGGATTCTATGATGAATGTCAGACCAAATATGGCAATGCTAATGCTTGGAGATATTGTTGTAAAGTGTTTGATCTGCTAACAATAGCAGCAATCATTGATGAAAGTGTTCTGTGTGTACATGGAGGTTTATCACCAGATATTAAAACTATTGACCAAATTCGTACAATAGAAAGAAATCAAGAAATCCCACACAAAGGAGCCTTCTATGTAGACACATGGGCCATCAGTCCTAGAGGAGCAGGATGGTTGTTTGGTGCCAAGGTAACAAATGAGTTTGTTCATATAAATGGTCTGAAATTGATATGTAGAGCTCATCAGTTAGTTCATGAAGGATACAAGTATATGTTTGATGAGAAATTAGTGACTGTATGGTCTGCTCCTAACTACTGTTACAGATGTGGAAATATAGCAGCAGTATTATCATTTACAGACGCTGACAACAGGGAGGCTAAATTGTTCCGTGCTGTACCAGATAATGAGAGAGTCATACCCAAAAAATCAACAACGCCGTACTTCTTGTAAAGCTGTAGACATTAATGAACTAAATACAAAAATACTTTTACAAGTATGATTCTGAAATATCTGAAATATGTGGAAGACAAACAATTGGTTTTTTTTTTTTTTTTTTTTAAATGTTGCAAAAATTAGCTACATATATATTTATTTATTGAAAATGGACTATTTAAATTGATTAGATTAAAATTTGGTCAGATTACGGAAGGTTTTGATAACAGAATTTTTTTTTAGAAAAAAAAAAGAAAGAGTTTTTAACCAGACTGACTGTACTTCTGTATGTTATTAATATTAAATACATATTATTTTTGTAAAATAGTGAGCTGTAATTGGTGGAGAATTTGTTTATACTAACACAGGGACAAATCTGGACAGTTTTCCTACAGTTACCTGCTGGGCTCTGTAAAATGACAGTTTTAGTAGCCCAGGTAAAATTCTTGGGGTTCAGCAAATGACAGTTATCTGCCCTTGTCAATGTGACAATACATACATTCATACCATTGAAGTCATACATAATATTTGTGTTAATAATTATTTCAAAGCAAATTCTTCATTCGTGTTTAAGATTCTTGGCTTTACAAAAAAGGGGGCTGATTATGTCATGTGTTATAATATGTTAAGCCCCCCTCCTCCATCCTAACATTTCACAAAACATGATTGAAGGTCATGTCCATGTAAACATTTGTATAGCAATACTTGTTTTAGTCAGCAGAATTTATGTTTTCATTGTGATTATAAAACATGACAAAGGCTGTGTTGAGTTTTTACCAGTGACGTTTGTATTGGCTGGTAATGAGTACATCTGTACATGCCATCTAATCAGGTTCTCTCAGATGATCATAGCTGACTTTAACAAGACTGAAACAGACCATATGATTGTCTCATTAGATATATCATTGACTAACTTTTGTTTCATTAAAGAATTTTTCACAATTTTAATGTTTTAAATGATAACATCAAAGCATAATGTATAGTACGTCAACATTAATTAATGTACTACAACAGTAGTCCCTGTCTTATGAGGCCACTCCCACCAAAGGCCACCCCTCTTATGAAGCCACCATCACCAAAGGCCACTCTTCTTAAAACGCTACTACCACGAAAGGCCACCCCTTTTATCAGATCAGATTTCCAATGCACAAAGTAAATTACTTTTAAATTGTGCCCTTCAAGGGAGGTCACCTCTGTTAGAAGGCCACTTTTTCATTGTAGACAGGGTGGATTGTAACAGGAGAGGGACTACTGTACAAGCAACT

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00149	Metallophos	Calcineurin-like phosphoesterase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR004843	Domain	Calcineurin-like phosphoesterase domain, ApaH type	Interproscan
IPR006186	Domain	Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase	Interproscan
IPR029052	Homologous_superfamily	Metallo-dependent phosphatase-like	Interproscan
IPR047129	Family	Serine/Threonine protein phosphatase PP2A-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45619	SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000082	Biological Process	G1/S transition of mitotic cell cycle	Interproscan
GO:0004722	Molecular Function	protein serine/threonine phosphatase activity	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0016787	Molecular Function	hydrolase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K15498	PPP6C; serine/threonine-protein phosphatase 6 catalytic subunit	EC:3.1.3.16	Protein phosphatases and associated proteins	ko01009	PMID: 28812709

Expression pattern

1. Expression trend for Bpl_scaf_55634-4.8 global RNA-seq network