| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_5555-1.6 | RETINOBLASTOMA-BINDING PROTEIN 5 | Bpl_scaf_5555 | 113605 | 136704 | + |
| CDS | |||||
| Bpl_scaf_5555-1.6 | |||||
| Transcript |
| Bpl_scaf_5555-1.6 |
| Protein |
| Bpl_scaf_5555-1.6 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | UBD|Other|Beta-prp |
| Ubiquitin Family | E3|E3 adaptor Cullin RING|CDC20 |
| Ubiquitin Family | E3|E3 adaptor Cullin RING|DWD |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00400 | WD40 | WD domain, G-beta repeat | Repeat | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001680 | Repeat | WD40 repeat | Interproscan |
| IPR015943 | Homologous_superfamily | WD40/YVTN repeat-like-containing domain superfamily | Interproscan |
| IPR019775 | Conserved_site | WD40 repeat, conserved site | Interproscan |
| IPR037850 | Family | Retinoblastoma-binding protein 5/Swd1 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR44040 | RETINOBLASTOMA-BINDING PROTEIN 5 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0048188 | Cellular Component | Set1C/COMPASS complex | Interproscan |
| GO:0051568 | Biological Process | obsolete histone H3-K4 methylation | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K14961 | RBBP5, SWD1, CPS50; COMPASS component SWD1 | - | Cushing syndrome | ko04934 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_5555-1.6 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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