Detailed information of Bpl_scaf_5538-3.8 in Gigantidas platifrons Gene info
Gene IDAnnotationScaffoldStartEndStrand
Bpl_scaf_5538-3.8VERY-LONG-CHAIN (3R)-3-HYDROXYACYL-COA DEHYDRATASEBpl_scaf_5538281353301475+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04387PTPLAProtein tyrosine phosphatase-like protein, PTPLAFamilyInterproscan
PF04969CSCS domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR007052DomainCS domainInterproscan
IPR007482FamilyProtein-tyrosine phosphatase-like, PTPLAInterproscan
IPR008978Homologous_superfamilyHSP20-like chaperoneInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR11035VERY-LONG-CHAIN (3R)-3-HYDROXYACYL-COA DEHYDRATASEInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0018812Molecular Function3-hydroxyacyl-CoA dehydratase activityInterproscan
GO:0030148Biological Processsphingolipid biosynthetic processInterproscan
GO:0030176Cellular Componentobsolete integral component of endoplasmic reticulum membraneInterproscan
GO:0030497Biological Processfatty acid elongationInterproscan
GO:0042761Biological Processvery long-chain fatty acid biosynthetic processInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K10703PHS1, PAS2; very-long-chain (3R)-3-hydroxyacyl-CoA dehydrataseEC:4.2.1.134
Fatty acid metabolism ko01212PMID: 28812709
Fatty acid elongation ko00062PMID: 28812709
Biosynthesis of unsaturated fatty acids ko01040PMID: 28812709

Expression pattern
 1. Expression trend for Bpl_scaf_5538-3.8 global RNA-seq network
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