Detailed information of Bpl_scaf_5538-19.6 in Gigantidas platifrons Gene info
Gene IDAnnotationScaffoldStartEndStrand
Bpl_scaf_5538-19.6CRUMBS FAMILY MEMBERBpl_scaf_553819542041972766-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00008EGFEGF-like domainDomainInterproscan
PF01414DSLDelta serrate ligandDomainInterproscan
PF07657MNNLN terminus of Notch ligand C2-like domainDomainInterproscan
PF12661hEGFHuman growth factor-like EGFDomainInterproscan
PF21700DL-JAG_EGF-likeDelta-like/Jagged, EGF-like domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000152PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR001774DomainDelta/Serrate/lag-2 (DSL) proteinInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR009030Homologous_superfamilyGrowth factor receptor cysteine-rich domain superfamilyInterproscan
IPR011651DomainNotch ligand, N-terminal domainInterproscan
IPR013032Conserved_siteEGF-like, conserved siteInterproscan
IPR018097Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR051022FamilyNotch Signaling and Cell Fate DeterminationInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR24049CRUMBS FAMILY MEMBERInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0007154Biological Processcell communicationInterproscan
GO:0007157Biological Processheterophilic cell-cell adhesion via plasma membrane cell adhesion moleculesInterproscan
GO:0007219Biological ProcessNotch signaling pathwayInterproscan
GO:0007275Biological Processmulticellular organism developmentInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0032991Cellular Componentprotein-containing complexInterproscan
GO:0045197Biological Processestablishment or maintenance of epithelial cell apical/basal polarityInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K06051DLL; delta-Notch signaling pathway ko04330PMID: 28812709
Th1 and Th2 cell differentiation ko04658PMID: 28812709
Breast cancer ko05224PMID: 28812709
Endocrine resistance ko01522PMID: 28812709

Expression pattern
 1. Expression trend for Bpl_scaf_5538-19.6 global RNA-seq network
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