Detailed information of Bpl_scaf_5538-17.6 in Gigantidas platifrons Gene info
Gene IDAnnotationScaffoldStartEndStrand
Bpl_scaf_5538-17.6RNA RECOGNITION MOTIF RRM DOMAIN CONTAINING PROTEINBpl_scaf_553817413851772473-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00076RRM_1RNA recognition motifDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000504DomainRNA recognition motif domainInterproscan
IPR012677Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR035979Homologous_superfamilyRNA-binding domain superfamilyInterproscan
IPR047190DomainSerine/arginine-rich splicing factor 4 (SRSF4)-like, RNA recognition motif 2Interproscan
IPR050374FamilyRRT5/SRSF/Splicing Factor SRInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR23003RNA RECOGNITION MOTIF RRM DOMAIN CONTAINING PROTEINInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0003729Molecular FunctionmRNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K12893SFRS4_5_6; splicing factor, arginine/serine-rich 4/5/6-Spliceosome ko03040PMID: 28812709
Herpes simplex infection ko05168PMID: 28812709

Expression pattern
 1. Expression trend for Bpl_scaf_5538-17.6 global RNA-seq network
TOP