| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_54972-4.12 | CCCH ZINC FINGER/TIS11-RELATED | Bpl_scaf_54972 | 425444 | 436789 | + |
| CDS | |||||
| Bpl_scaf_54972-4.12 | |||||
| Transcript |
| Bpl_scaf_54972-4.12 |
| Protein |
| Bpl_scaf_54972-4.12 |
| Gene family | Subfamily |
|---|---|
| Transcription Factors Family | zf-CCCH |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00642 | zf-CCCH | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | Family | Interproscan |
| PF14608 | zf-CCCH_2 | RNA-binding, Nab2-type zinc finger | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000571 | Domain | Zinc finger, CCCH-type | Interproscan |
| IPR008913 | Domain | Zinc finger, CHY-type | Interproscan |
| IPR036855 | Homologous_superfamily | Zinc finger, CCCH-type superfamily | Interproscan |
| IPR037274 | Homologous_superfamily | Zinc finger, CHY-type superfamily | Interproscan |
| IPR045877 | Family | RNA-binding protein ZFP36-like | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR12547 | CCCH ZINC FINGER/TIS11-RELATED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003729 | Molecular Function | mRNA binding | Interproscan |
| GO:0008270 | Molecular Function | zinc ion binding | Interproscan |
| GO:0046872 | Molecular Function | metal ion binding | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
| 1. Expression trend for Bpl_scaf_54972-4.12 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
© 2024 All Rights Reserved.
