| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_54972-1.5 | VESICLE PROTEIN SORTING-ASSOCIATED | Bpl_scaf_54972 | 119492 | 150557 | + |
| CDS | |||||
| Bpl_scaf_54972-1.5 | |||||
| Transcript |
| Bpl_scaf_54972-1.5 |
| Protein |
| Bpl_scaf_54972-1.5 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00995 | Sec1 | Sec1 family | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001619 | Family | Sec1-like protein | Interproscan |
| IPR027482 | Homologous_superfamily | Sec1-like, domain 2 | Interproscan |
| IPR036045 | Homologous_superfamily | Sec1-like superfamily | Interproscan |
| IPR043127 | Homologous_superfamily | Sec1-like, domain 3a | Interproscan |
| IPR043154 | Homologous_superfamily | Sec1-like, domain 1 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR11679 | VESICLE PROTEIN SORTING-ASSOCIATED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000139 | Cellular Component | Golgi membrane | Interproscan |
| GO:0006886 | Biological Process | intracellular protein transport | Interproscan |
| GO:0016192 | Biological Process | vesicle-mediated transport | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K12479 | VPS45; vacuolar protein sorting-associated protein 45 | - | Endocytosis | ko04144 | PMID: 28812709 |
| Autophagy - yeast | ko04138 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_54972-1.5 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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