| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_54968-1.11 | RNA POLYMERASE III DNA DIRECTED -RELATED | Bpl_scaf_54968 | 92528 | 110719 | + |
| CDS | |||||
| Bpl_scaf_54968-1.11 | |||||
| Transcript |
| Bpl_scaf_54968-1.11 |
| Protein |
| Bpl_scaf_54968-1.11 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF05645 | RNA_pol_Rpc82 | RNA polymerase III subunit RPC82 | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR008806 | Domain | RNA polymerase III Rpc82, C -terminal | Interproscan |
| IPR036388 | Homologous_superfamily | Winged helix-like DNA-binding domain superfamily | Interproscan |
| IPR039748 | Family | DNA-directed RNA polymerase III subunit RPC3 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR12949 | RNA POLYMERASE III DNA DIRECTED -RELATED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003677 | Molecular Function | DNA binding | Interproscan |
| GO:0003697 | Molecular Function | single-stranded DNA binding | Interproscan |
| GO:0005666 | Cellular Component | RNA polymerase III complex | Interproscan |
| GO:0006351 | Biological Process | DNA-templated transcription | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K03023 | RPC3, POLR3C; DNA-directed RNA polymerase III subunit RPC3 | - | Purine metabolism | ko00230 | PMID: 28812709 |
| Pyrimidine metabolism | ko00240 | PMID: 28812709 | |||
| RNA polymerase | ko03020 | PMID: 28812709 | |||
| Cytosolic DNA-sensing pathway | ko04623 | PMID: 28812709 | |||
| Epstein-Barr virus infection | ko05169 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_54968-1.11 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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