Detailed information of Bpl_scaf_54931-1.10 in Gigantidas platifrons Gene info
Gene IDAnnotationScaffoldStartEndStrand
Bpl_scaf_54931-1.10ZINC FINGER PROTEIN 183Bpl_scaf_54931110250149636+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Transcription Factors Familyzf-CCCH

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00642zf-CCCHZinc finger C-x8-C-x5-C-x3-H type (and similar)FamilyInterproscan
PF13923zf-C3HC4_2Zinc finger, C3HC4 type (RING finger)DomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000571DomainZinc finger, CCCH-typeInterproscan
IPR001841DomainZinc finger, RING-typeInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR017907Conserved_siteZinc finger, RING-type, conserved siteInterproscan
IPR036855Homologous_superfamilyZinc finger, CCCH-type superfamilyInterproscan
IPR039971FamilyPre-mRNA-splicing factor CWC24-likeInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR12930ZINC FINGER PROTEIN 183Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005684Cellular ComponentU2-type spliceosomal complexInterproscan
GO:0034247Biological ProcesssnoRNA splicingInterproscan
GO:0046872Molecular Functionmetal ion bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K13127RNF113A, CWC24; RING finger protein 113A-Spliceosomeko03041PMID: 28812709

Expression pattern
 1. Expression trend for Bpl_scaf_54931-1.10 global RNA-seq network
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