Gene detail

Detailed information of Bpl_scaf_54922-1.16 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_54922-1.16	INHIBITOR OF GROWTH PROTEIN	Bpl_scaf_54922	109481	115572	+

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

Bpl_scaf_54922-1.16

CCAAAACGAGGTAATGTTCAACTCATTCGGAGGGAAACACCAATGACTGAATTTGTTGTGTATTATCAATAACCAGAAATCTGGTAATATTTAAAAGGAGGACTTAAATATGACAATGTTGAACCAGGCAGCAGTCGAGGCGTTGTGTTCGGCAACATATTTAGAGAATTACCTCGACACGATGGATAACTTGCCGGACGACCTGCAGCGAGTTGTGACACAGATGCGAGAGCTAGACATCCAATGTCGAGGCTTGAAATCTAATGTTGAATTTCTAGATATACTTGCTGATATTGATGTTCATCAAGAAACCTTCCAAAATGAACCAGACAGTGCACAAGCGAAGAGAAAGGCTATGATAGCAATGCAGAGAGCGTTGATCAAATGTCAAGAAATTGGCGATGAAAAATTAATGTTATTAGCATGTATAATGGACCACATAGAGAACAGAGCAAGACAGTTAGAACAAGACAGAGAAAACCTTGGATGATAAAGACAAAGGTCCTAAGAAGAAAAAGAAAAGAAAAACTAAAAAAGAACAAACTGCCACATCCCCTATAGACCCTCCGATTGACCCCGATGAACCTACGTACTGTTTGTGTAACCAAGTATCGTACGGTGAAATGATAGGATGTGACAATGACATTTGTGTTATCGAATGGTTCCATTTTAATTGTGTAGGACTTGTCAATAAACCAAAAGGAAAATGGTTTTGTCCGAATTGTCGGGGTGAGACGAGTAAAGTTATGAGAAGACTCGATAAGTCATAGTGCAATAATAGTTTTATTGATATGCAATATAATTTCTGAAAGTGGTACAATAAGTGTCATTAAACATGTACAATTTGTGATTGTTTTTGTAAGACTTGAGTTAGAGAGTCAACATGTATGTTATTGTGTTGACCATGTGATTATTTCTTTATCCTTAAATCATGTGATCACAGAATGCCATGTATGGAAATTCATTTGCATGTATCTGGTACAAAATGTATTGTCAAATCTGTCTAAAGCTACTTATGTGAGACAGCAAAAGTGATACAGATGATTTGTTTAAAGTGCCATTGACACTTTTGTATTTAGAAAGTACTTTTATGTGAGTTGAAAATATTTTTATTGATAGCTCACCTGTCCCTAAAAGGTCACGTTATCTTGCCATCACTTGGTGTCTGTCCGTCTGTAAACATGTGAAAAAATCTCCTTTGATGCCACTGGACAAATTATGCCAAGTAATGTAATGAAACACTATCACACTTTTGTATATACAGCTTTGCACTTTTCACTGTTGCCGATGATTTAGAACTGACTTATAAATAGTTCTATATGATAAATCCTCAAGATTCCAGAGTACAAAGGCCATCCGACATATAGATAAATGGACTTATAGTTGAGTAGGCTGATTTAGACAAAAAAATTATTTAATAGTCTTCTCTTAAATTCAAAGGCCAAATAAAACGAAGCCTTAGGTAGTAGGTACCCATTCTATATTGTATCAGGGGCTGTCGTATCAGGGTTGTGATCTTATGGTAGTTGGATTTACAACTACGTAACCTATTCAATCGGTGCCTATTACCACTAAGTTGTGAATTCAAAGCCCACTCATGGCCAGGTGTACTCGATACAACATTGTCAGTGATTTGCTGCTGGTTAGTGGTTTTCTCCGAGTACTCCGGTTTCCTCCACCAATAAAACTGACTACCACATTATAGCTGAAATATTGTTGAAAGTGGCGTTAAACACCATAAACCAAGCAATACCTCATCAAATTCAAAGTGGTGTTAAATGCCATAACCCTAACCCTCTAAATTGTATCAGTGGCCTGATTAAGAAAATCTGAGATCCAAGATGGCTGCCATTACTTAAGTCAAATGATAGGTTGTTTTTTTATTTTTATACACTGGAAATCTTAAGTTGACATACACCACAGGATATTGTTTATCCATGGTTATGTTACTAAAAAGCTTTTTCTCAAAATCTACAAATTTGCTTGAACCAAAACAGTACATGAATACCCAGGTGAGCAATCAGTCCAAGATGAGCCTCTAGTTTGTTTTAATACAGTCAAACCTGCTTTAGTGGCCACCTCTATTAAGCAATAACTTGTATCATGTGACCTTAATATTTATTTCATTTTACAGTGCATTTCATATCAATTAAACCTGTATTAAGCGACCAACTGTCTTGTGTGACCATATTTTTCTAGTCCCTTGGAAGGTCACATAAGGCAGGTTTGACTACTAGCAGTTTTTATGTTTCAAATATTAAAGTACATTCAAATTTTCCAGAAAATTCTTCAGGAAGGTCACTGTTGCAAATTCAAGAGGAAAGCATCTTGAACTGTAGTATTTTAATAAGGATAACATGTCAGTATTTTTAAGGTCATAATAAGATGTCACTAATAACCAAAGATGTGTTTTTGTTGCCTCTTCTTTAAACAGGAAATGTATTGTTAGTGACCATTGTCTATACATATTTAATTGATTTCCATTGTCTAACAAGGGGCATTCATGGTTGTGATGGTATGGTAGTTGGATTTACAACTACTTCTGCAATCAGTACCTATCACCACTAATGTTGTGAGTTCAAATCCTCCTTATTGATAGGTGTACTCTATACAACATTATGTGACAATGTTTGTTAATGACTTTTGGGGGCAAGCTTTCAAAAATCACAAGCAAACAAAAAAGATAATTTGGCTTAAAATTCAGCTTTTTCTAAATTTTCACCAAAAAAAGTGTGGGGGGACATTCCTTTACACTTTTAAGTGGGGGGAATGTGCCCACGGCTCCTCCGCGGCGACAACTATTTGTTGAATTCTTATCCCGTTAATTTCATGGTTTGATACAACCGACAAATTCCACAAAATGTGTATATCATGAATAATGAATTCAGTGATAAATTCATATGATGTTAAATTATTTTAAGGAGACCTCTGCAAACGGCTATCTACCCCTCGATAGTTCATTCATTGACAGTCAGTCCATAGCAGGGTAATATTCACATGATGTATTTTTTGTATTGGTGGTATGTAGAATATTATTTCTTAGAATATTTATTAACATACTATTAACAGAACTGGAGTAGATATTGACTGTCATAATTTATATTTTTGAAGCACCAG

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12998	ING	Inhibitor of growth proteins N-terminal histone-binding	Coiled-coil	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR024610	Domain	Inhibitor of growth protein, N-terminal histone-binding	Interproscan
IPR028651	Family	ING family	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10333	INHIBITOR OF GROWTH PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0035064	Molecular Function	methylated histone binding	Interproscan
GO:0045893	Biological Process	positive regulation of DNA-templated transcription	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K19197	ING1; inhibitor of growth protein 1	-	Chromosome and associated proteins	ko03036	PMID: 28812709

Expression pattern

1. Expression trend for Bpl_scaf_54922-1.16 global RNA-seq network