Gene detail

Detailed information of Bpl_scaf_54882-1.7 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_54882-1.7	ABHYDROLASE DOMAIN-CONTAINING PROTEIN	Bpl_scaf_54882	96700	120476	+

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

Bpl_scaf_54882-1.7

ATTTGACATTTATCACCTGATCCTACCAATACCATGTCGGCATATCCGTATCATTGACATAGGTCGTGATAGGATAACGTTGTATCCTTGTTCAGAAAAATGGAGGTTGCAGCAGTTATCGAGTTTTTCCAAAATAATACGTCATTAATTATTTGTTCAACATTTCTTGTGATATATATTTTGTACTACTTTATTTTTGTCGTAAAGAAGCCACATATTGCCTGTAAAGACCAGAAGTTTAAAGATTTCTTATTGAATCACTGCCCAGTATTAAGTAGCAAATTTAAACCAACAATATGGTGCTTTGAATCAAGAATGCAGACCATACTGAGGTCCTTTATACCAACATCATTGAAAGTGACGTATGAGGCGGAAATAGTGACTTTGGCTGATGGAGGACAGGTTATTTTAGACTGGTATGAGAATGAAAATACTATCTTTCCTGACAAAGAGACCAGACCAACGATACTGTTACTTCCCGGGTTAACAGGTGACAGTAGCTGTCCTTATATCCTCCATCTTGTCACTGAAGCTGCTGAACATGGATACAGATCTGTAGTATTTAACCAAAGAGGAAATGGAGGAGCCAAGTTAAAGACACCCAGAACTTACTGTGCAGCCAACACAGAAGATTTAGCTCATGTTGTCTCTGTCATCAAAGGGAGATTACCCAATGCTCCAGTAATTTGTGTTGGGATTTCATTAGGAGGAATGCAGCTATTTAATTACCTAGCTAAGTTCGGTGATAAATGTCTACTAGAGGCTGGTATGTGTGTATCTGTAGCATGGAATGTATTTGAATCAGTTTTAGAGCTAGAGAAACCAGGTATCAACTTACATGTGATCAACAGACAACTAGCTAATACATTGGTTCAGTTAGTTCAAAAAAATATGGAAGTATTTGAGAATCATTTTGATAATATTGATCATATTCTTAAGGCTAGCACGATTCGTGAGTTTGATGAGAGATTTACAGCAAAAGTCTTTGGTTACGATACCTGGCAGGATTATTACAGAGAAGCATCTTTACATGATAAAATCCATGCATTGAAAGTGCCTGTGTTAGTTCTTAGTGCTGCTGATGATCCATTTTCACCATATCACGCAATTCCAGTGAAAGAAGCAGAAGAGAATGACAACATTGCCATTGTAGTGACATCACATGGTGGCCATATTGGATTTATGGAAGGCTTAATACCTAGAAGTAGTACATACATGGATAAACTATACTCACAATACATTAAAGCTGTCATTAATCATGGTCCAACACATCTTAAACAGGATTGATGTTGTACTGTAATACATGTCTGCCAGTAGGGGGCAGTGCTATATATATATAGTATTGTCACACGGCGGGCATAATAGTTTTGAAGAAGGCTTTCTCAAAGTATATATCAAAATCTCATACATGGTTTGTGTTGTTAAAATATTTAATCCTAAACACAGTTTAGTTCTTTATAAACATTTATGCTTCTCTGTAATTTGAATTTCAACAATTATATTGTAATATCAATATTTTTTTTAAGGAAAAGGGACAGATGGCTCTTTTAGTATTAAACAATATGGCCAAAATCTTGCCAAATATGATGCATTACAATATGTTTACAGCATCTCTGGTTGTCATGCCATTCAGTTAAAATGAACTATGACAGTAAAATGGTGGAAATTTTTTTCATCTATCATTTTGAATGGAAATTTTTGAATGTGAAAAATTTTGGTGATTATATCAGATTTATTTGCCAAAAATTATTCAATGCTCTAAAACTTGCTAAATTAGAACAAACCATGTATGTTTGTTGCCAAATCTATATATAATTGTTAGGGACCATTTAAAAAAGGTCCCATATTATTTGTATACAGACTTAATTTGATATTGTGAACACTGCCAAAATGTAAATTTATAATAGGGACCCACCATTTAGCTTGTAGCAAAAATCAGATAATATTTTAGACATGAAAATTCAGTATTATCTTCAGTTTTTACCAAAAAGTCTCATTGAAAACTGCAGGGTCAGATTATCCATTTTTTGCCATCTTTTCATCATCAATAACCCACGGCTGATCATGCTTTTATTTCTTTCCACTCATCACTCGTGGGTCAACTGGCAGAAAATAATAGTTTCGTTGAAAAAAGCTATGAATAGTTACCAGTTGAAATCATGAAAAAGCTATCCAGAAAAATGTTGATTTCCATAATTGGCAAGGAATCTTTTTTTTAATTTAGATACATTTAAAAGCTGTGATTTGATTGGCAATAAAGACGATAATCGGGACTTATCAATGTATTTAAAAACGACCACATGACAACAAGGATGACCCATAGGTGATGAATACAGAGTAATCAAAGTGTGATCAGTTGTGCGTTACCAACAATGGTATCTTTCAGGCAATTTTTTTTTTCTCAAAAAGTTAAATGGTTGTTCCGTTATTATAAAAGATATTTTTTTACACTTGTTGAGTTCATGCTAAAGTATAAGTCATCATGACCTGACCTTGACTTGATTCTAATTGGTTACCATTTGTTTTACTAAATATGATTGACACATGTCATTTTCATCAGTATTTGAAAGTGTAATAAAGTAGGTTACAGCAACATTTAGACCACAA

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00561	Abhydrolase_1	alpha/beta hydrolase fold	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000073	Domain	Alpha/beta hydrolase fold-1	Interproscan
IPR012020	Family	AB hydrolase 4 family	Interproscan
IPR029058	Homologous_superfamily	Alpha/Beta hydrolase fold	Interproscan
IPR050960	Family	AB hydrolase superfamily, subfamily 4	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10794	ABHYDROLASE DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0008126	Molecular Function	acetylesterase activity	Interproscan
GO:0034338	Molecular Function	short-chain carboxylesterase activity	Interproscan
GO:0044255	Biological Process	obsolete cellular lipid metabolic process	Interproscan
GO:0047372	Molecular Function	monoacylglycerol lipase activity	Interproscan
GO:0051792	Biological Process	medium-chain fatty acid biosynthetic process	Interproscan
GO:0051793	Biological Process	medium-chain fatty acid catabolic process	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K13696	ABHD1_3; abhydrolase domain-containing protein 1/3	-	Non-coding RNAs	ko03100	PMID: 28812709

Expression pattern

1. Expression trend for Bpl_scaf_54882-1.7 global RNA-seq network