Detailed information of Bpl_scaf_54665-12.9 in Gigantidas platifrons Gene info
Gene IDAnnotationScaffoldStartEndStrand
Bpl_scaf_54665-12.9VESICLE TRANSPORT V-SNARE PROTEIN VTI1-RELATEDBpl_scaf_5466511884451198762-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05008V-SNAREVesicle transport v-SNARE protein N-terminusFamilyInterproscan
PF12352V-SNARE_CSnare region anchored in the vesicle membrane C-terminusDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR007705DomainVesicle transport v-SNARE, N-terminalInterproscan
IPR010989Homologous_superfamilySNAREInterproscan
IPR027027FamilyGOSR2/Membrin/Bos1Interproscan
IPR038407Homologous_superfamilyVesicle transport v-SNARE, N-terminal domain superfamilyInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR21230VESICLE TRANSPORT V-SNARE PROTEIN VTI1-RELATEDInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000149Molecular FunctionSNARE bindingInterproscan
GO:0005484Molecular FunctionSNAP receptor activityInterproscan
GO:0005789Cellular Componentendoplasmic reticulum membraneInterproscan
GO:0005794Cellular ComponentGolgi apparatusInterproscan
GO:0006886Biological Processintracellular protein transportInterproscan
GO:0006891Biological Processintra-Golgi vesicle-mediated transportInterproscan
GO:0006896Biological ProcessGolgi to vacuole transportInterproscan
GO:0006906Biological Processvesicle fusionInterproscan
GO:0012507Cellular ComponentER to Golgi transport vesicle membraneInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0016192Biological Processvesicle-mediated transportInterproscan
GO:0016236Biological ProcessmacroautophagyInterproscan
GO:0031201Cellular ComponentSNARE complexInterproscan
GO:0031902Cellular Componentlate endosome membraneInterproscan
GO:0042147Biological Processretrograde transport, endosome to GolgiInterproscan
GO:0048280Biological Processvesicle fusion with Golgi apparatusInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K08493VTI1; vesicle transport through interaction with t-SNAREs 1-SNARE interactions in vesicular transport ko04130PMID: 28812709
Autophagy - yeast ko04138PMID: 28812709

Expression pattern
 1. Expression trend for Bpl_scaf_54665-12.9 global RNA-seq network
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