Gene detail

Detailed information of Bpl_scaf_54495-4.23 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_54495-4.23	NEUROPATHY TARGET ESTERASE/SWISS CHEESE D.MELANOGASTER	Bpl_scaf_54495	376661	415870	+

Gene Structure

More details in Jbrowse Sequence

CDS

Bpl_scaf_54495-4.23

Transcript

Bpl_scaf_54495-4.23

CTGATATTTTTTTGTTTTTTCTTCCAGTCATTGTTATTCATAGCTTTACCAGGAGAAGTTGTTGGTTCCCTGGCTGTTTTAACGGGTGAACCGTCTTTCTTTACCATGCGTGCCAAAATAGACACCATTGTTGTAACAATATCTAAAGTAGATTTCTACAGTATGATGAGAGAACAGCCATCAATAGTATTAAATGTTGCTCACACCTTAGCTGTGAGGATTGCACCATTTGTCAGACAGATTGATTTTGCCTTGGATTGGATGATGATTGAAGCTGGAAAAGCATTGTTCAGGACTCATCATAATGGTAAAAAGTCACTGGTATCTGAGTATGGCCGTGGAGAACTTGTAGGTATTGTAGAAGTGCTGACAGACTCGGCTAGAACAACTACAATCATGGCTGTGAGGGACACAGAATGTGCCCATTTACCAGCAGAGTTACTGAACCTGATTAAAAGGAAATATCCACAGATTGTTACTAGACTGATACATTTGTTAGGACAGAGGATTCTGGGACATATAGAGACCAGAGATGAAGTACCAATAGGGATAGAAAAGAAAGTGTCAGTTGGTAACTTAGCTACCATAGCAGTATTAGCTTCCTCTAAAGATGTACCTCTAACTAGTTTTACTTTAGAATTACTACACTCTCTCACAGCCATTGGTGAGACCACAAGGCTTACTAGTGAAATTGTAGAGAAACAAATGGAGAATATAGCAGTAAGAGCCCAAAAAGAATTGGTTTTGTTACACAACGAGGATGCTGAATCACCGAGAGGAACCATAGAATGGTTAAACGCCAGAGGATGGTGTTCATCACACCATCATATAAGATGTCCTAAACGTGTCTTGAAAAAACAGCCAGAATTTAAAGTAGTTGAATGCTATGACAAAATATTCCAGACTGTTTCAGACAGATTGTCTGATTTTTCACGTCTTGCCAGATTTTTAACAGGAACTTCTATTGGTCTAGTCTTGGGAGGTGGTGGAGCTAGGACTTCTATTGGTCTAGTCTTGGGAGGTGGTGGAGCTAGGATAGGAGGGACCAATATAGGATACTTTATTTGGGCTTCATGGTGTGAAGGTTTACACAGAGGTGTAGAGAGTGGTCTATGGTTTACACAGAGGTGTAGAGAGTGGTTTAGGGACATGACATCAATCTGGAAGAAAGTGTTAGATCTGACATATCCTGTTACATCTATGTTTACAGGTAGTACATGGAGGTATGTCAGAGCTAGTATGTCATTATCAGGATACTTACCACCTCTCTGTGATCCTGTGGATGCACATTTACTACTAGATGGAGGCTATGTCAACAACTTGCCAGGATACCTACCACCTCTTTGTGATCCTGTAGGTAATATAGGTAGTACGTGGAGGTATGTCAGAGCTAGTATGTCATTATCAGGATACCTACCACCTCTTTGTGATCCTGTAGGTAATATAGGTAGTACGTGGAGGTATGTCAGAGCTAGTATGTCATTATCAGGATACCTACCACCTCTTTGTGATCCTGTAGGTAATATAGGTAGTACGTGGAGGTATGTCAGAGCTAGTATGTCATTATCAGGATACTTACCACCTCTCTGTGATCCTGTGGATGCACATTTACTACTAGATGGAGGCTATGTCAACAACTTGCCAGGATACCTACCACCTCTTTGTGATCCTGTAGGTAATATAGGTAGTACGTGGAGGTATGTCAGAACTAGTATGTCATTATCAGGATACCTACCACCTCTTTGTGATCCTGTAGGTAATATAGGTAGTACATGGAGGTATGTCAGAGCTAGTATGTCATTATCAGGATACCTACCACCTCTCTGTGATCCTGTAGGTAATATAGGTAGTACGTGGAGGTATGTCAGAGCTAGTATGTCATTATCCGGATACTTACCACCTCTCTGTGATCCTGTGGATGCACATTTACTACTAGATGGAGGCTATGTCAACAACTTGCCAGCTGATGTAATGAAACAATTAGGAGCCAATTCTATATTTGCTGTTGATGTGGGTAGTCAGGATTCACAGGATGTATATAACTATGGTGATCAGATCTCAGGGTGGTGGTTATTAGCCAATAAATGGAGTCCATGGTCAGAAACAGTGAAGGATGTTGGGTACCAGCATGGTAAAGCATTACTAAGTGGCTGGATAAAAGGTGGACTCGTTGATGAACTGTTTAAACCTAAAACTGCTCACAGAAAAGCCTTCAAGGATAAACCACTGAAAAGAGTTCAGACGATTGCACAGCCATCCATGGCCAAGTTTACTGACCTAGCAGAGTTAGTATCTAAGATAGAGGAGCCAAGTCCTTCTTCCAATGTCTCACAGAGTAGTTTTGATACTGATGAAGGAGACAAACGGATTAATGATAAGGTACTTTTACCCGTGGTAGGAGTAGATGGAGTAGCAGAGATCATGGTGTCAACACCGTCGTTGGCTGCCTGGGATACAAGTACATCACGTTGGTTACTGCAGTTCGATGGATCGGGCAAGCCTGGTGTGACTGGAGCTTTAACCTTTATACTACCGGACTTTAAACCACTGGGATCATCAGGGCTTCAACACAATGATCTACCATACTCGAGGGGATCATCAGGGTTTCAACCCCATGATTTACCATACTCGAGGGGACCGTCAGGGCTTCAACCTCATGATCTACCATACTCGAGGGGATCGTCAGGGCTTCAACCCCATGATTTACCATACTCGAGGGGACCGTCAGGGCTTCAACCCCATGATTTACCATACTCGAGGGGATCATCAGGGCTTCAACACAATGATCTACCATACTCGAGGGGATCATCAGGGTTTCAACCCCATGATTTACCATACTCGAGGGGACCATCAGGGCTTCAACCCCATGATCTACCATACTCGAGGGGACCGTCAGGACTTCAACCCCATGATTTACCATACGCGAGGGGATCGTCAAGGCTTCAACCCCATGATCTACCATACTCGAGGGGACCGTCAGGGCTTCAACCCTATGATTTACCATACTACCATACTCGAGGGGATCGTCAGGGCTTCAACCCCATGATTTACCATACTCGAGGGGATCGTCAGGGCTTCAACCCCATGATTTACCATACTCGAGGGGACCGTCAGGGCTTCAACCCCATGATTTACCATACTCGAGGGGATCGTCAGGGCTTCAACCCCATGATTGACCATACTCGAGGGGACCTCTGATGGATCACTTAGACACAGATTGCCAGTAACAATACCTGAATAATCAACATTGTGATAAATTCAGAATGAGGGACCAACAGTCAGTTCTACAAATAGACCACACGAAAAAGACATGGCATATAATTATTATTTTATAAATACTTTGTATATAATTATCCATGTCTAAACTTTTATCTATGCATTTGACAATGAACAATGATATTATTTTATAGTACTTTTGTCCTTTACAGACTGACAAAGTTTGCTAGTGATACATACTTGGACATGACTAGCTTTAAATGTACCAGTATATAAATCTATTAGGATTTAAAGGGGGGATTTTCTATCTTCTAGTTAAATATGTGATGTTTTCTGTTTTGACATACCAGTATTTTATTTTAAGATACTAAAATATGACTTTCCAAATTGTTATTAGCCCACCAGAGCCAAAGTCTCAAGTGAGCTTTTTGCATCACTTGACGTCCGGTATCTGTTAACGTATTACATTTTTATCTTCTTCTCAAGAACCCCTTGTCCAAATTGGACCAAAATTGGATATAGTAAACCTTGGATGGTCCTCTGCCAAAATTGTGTCCAGTTACCTTGCTTCTAAGATGGCCGACATAGCTGTGGATTTATTGAAAACTGGAAATATTTGAAAATCTTCTTCAGAAACATTGTATGGCATGAAACCACATTTTGTCCAAAGTCTTTTGGTGGTACCCTTCCAAAATTGTGTCTATTGACCCTGTCAATTATCTAAGATGGCCACCATGTCTGATTATATAACTGTCATTTTTCAGGTAGATAAAAGCAGATATTTCTGAACGTGAAATTTTCAACCACAAGCCGTGGAGATCAGATTGGCAGTTAAAATTTCAGTGAGAAATATTGTTATTGATTAGATGTCAAATTCAAAATATTGATTTTCTCTTTTGATGGTGATGATAAAATTCAAAGAAATTGTATCCTCACAACAACTATGGAATAAAAATACTGGTGATATAAAAAAATAAATAAATGAGTTTTGTCAGTGAGATGTAGTCAATTAACTCTCTTACTACAAAACAAAAGGGAGACAAGTCATAAGTGCTTACTTATCAATGCAAAGTGTTTAAACCTTTAATGTGCCAATGATTGTTTGTTTTATTTGATGAATAATTTGTTATGATTTATTTGTGTAGTGTTTCTTTAGATTTTTTTTATCATTTACCTTTTGGTTGAAGTCAGTCACCAATTTACATCAGCACTAGATCATTAAACAAAAAAACAGTTGTGGCTGCTGCAGTTTTGGTCTCGCCAATAATTATGTTTAAATATACAATTACAACTGTAGCTGTAGTAGTCTTCTAAAATGTGTTGTACATAGTGTACAAGTACAAAATGACAATATCAATACTAAT

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00027	cNMP_binding	Cyclic nucleotide-binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000595	Domain	Cyclic nucleotide-binding domain	Interproscan
IPR002641	Domain	Patatin-like phospholipase domain	Interproscan
IPR014710	Homologous_superfamily	RmlC-like jelly roll fold	Interproscan
IPR016035	Homologous_superfamily	Acyl transferase/acyl hydrolase/lysophospholipase	Interproscan
IPR018490	Homologous_superfamily	Cyclic nucleotide-binding domain superfamily	Interproscan
IPR050301	Family	Neuropathy target esterase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14226	NEUROPATHY TARGET ESTERASE/SWISS CHEESE D.MELANOGASTER	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004622	Molecular Function	lysophospholipase activity	Interproscan
GO:0005783	Cellular Component	endoplasmic reticulum	Interproscan
GO:0006629	Biological Process	lipid metabolic process	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K14676	NTE, NRE; lysophospholipid hydrolase	EC:3.1.1.5	Glycerophospholipid metabolism	ko00564	PMID: 28812709

Expression pattern

1. Expression trend for Bpl_scaf_54495-4.23 global RNA-seq network