Detailed information of Bpl_scaf_54310-1.17 in Gigantidas platifrons Gene info
Gene IDAnnotationScaffoldStartEndStrand
Bpl_scaf_54310-1.17WD REPEAT DOMAIN-CONTAINING FAMILYBpl_scaf_54310132134186756-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00400WD40WD domain, G-beta repeatRepeatInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001680RepeatWD40 repeatInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR045151FamilyDDB1- and CUL4-associated factor 8-likeInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR15574WD REPEAT DOMAIN-CONTAINING FAMILYInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0030374Molecular Functionnuclear receptor coactivator activityInterproscan
GO:0045944Biological Processpositive regulation of transcription by RNA polymerase IIInterproscan
GO:0080008Cellular ComponentCul4-RING E3 ubiquitin ligase complexInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K11795DCAF6, IQWD1, NRIP, ARCAP; DDB1- and CUL4-associated factor 6-Ubiquitin systemko04121PMID: 28812709

Expression pattern
 1. Expression trend for Bpl_scaf_54310-1.17 global RNA-seq network
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