| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_54175-1.6 | PHOSPHOLIPASE A-2-ACTIVATING PROTEIN | Bpl_scaf_54175 | 160540 | 188473 | - |
| CDS | |||||
| Bpl_scaf_54175-1.6 | |||||
| Transcript |
| Bpl_scaf_54175-1.6 |
| Protein |
| Bpl_scaf_54175-1.6 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | UBD|Other|Beta-prp |
| Ubiquitin Family | E3|E3 adaptor Cullin RING|CDC20 |
| Ubiquitin Family | UBD|Other|PFU |
| Ubiquitin Family | E3|E3 adaptor Cullin RING|DWD |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00400 | WD40 | WD domain, G-beta repeat | Repeat | Interproscan |
| PF08324 | PUL | PUL domain | Repeat | Interproscan |
| PF09070 | PFU | PFU (PLAA family ubiquitin binding) | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001680 | Repeat | WD40 repeat | Interproscan |
| IPR011989 | Homologous_superfamily | Armadillo-like helical | Interproscan |
| IPR013535 | Domain | PUL domain | Interproscan |
| IPR015155 | Domain | PLAA family ubiquitin binding domain | Interproscan |
| IPR015943 | Homologous_superfamily | WD40/YVTN repeat-like-containing domain superfamily | Interproscan |
| IPR016024 | Homologous_superfamily | Armadillo-type fold | Interproscan |
| IPR020472 | Repeat | G-protein beta WD-40 repeat | Interproscan |
| IPR036322 | Homologous_superfamily | WD40-repeat-containing domain superfamily | Interproscan |
| IPR038122 | Homologous_superfamily | PFU domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR19849 | PHOSPHOLIPASE A-2-ACTIVATING PROTEIN | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0005634 | Cellular Component | nucleus | Interproscan |
| GO:0005737 | Cellular Component | cytoplasm | Interproscan |
| GO:0010992 | Biological Process | ubiquitin recycling | Interproscan |
| GO:0043130 | Molecular Function | ubiquitin binding | Interproscan |
| GO:0043161 | Biological Process | proteasome-mediated ubiquitin-dependent protein catabolic process | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K14018 | PLAA, DOA1, UFD3; phospholipase A-2-activating protein | - | Protein processing in endoplasmic reticulum | ko04141 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_54175-1.6 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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