| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_53773-3.12 | DNA REPAIR PROTEIN RAD51 HOMOLOG 3 RAD51C | Bpl_scaf_53773 | 347537 | 360199 | + |
| CDS | |||||
| Bpl_scaf_53773-3.12 | |||||
| Transcript |
| Bpl_scaf_53773-3.12 |
| Protein |
| Bpl_scaf_53773-3.12 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF08423 | Rad51 | Rad51 | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR010995 | Homologous_superfamily | DNA repair Rad51/transcription factor NusA, alpha-helical | Interproscan |
| IPR013632 | Domain | DNA recombination and repair protein Rad51-like, C-terminal | Interproscan |
| IPR016467 | Family | DNA recombination and repair protein, RecA-like | Interproscan |
| IPR020588 | Domain | DNA recombination and repair protein RecA-like, ATP-binding domain | Interproscan |
| IPR027417 | Homologous_superfamily | P-loop containing nucleoside triphosphate hydrolase | Interproscan |
| IPR052093 | Family | Homologous Recombination Repair Mediator | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR46239 | DNA REPAIR PROTEIN RAD51 HOMOLOG 3 RAD51C | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000166 | Molecular Function | nucleotide binding | Interproscan |
| GO:0000400 | Molecular Function | four-way junction DNA binding | Interproscan |
| GO:0000707 | Biological Process | meiotic DNA recombinase assembly | Interproscan |
| GO:0003677 | Molecular Function | DNA binding | Interproscan |
| GO:0005524 | Molecular Function | ATP binding | Interproscan |
| GO:0005657 | Cellular Component | replication fork | Interproscan |
| GO:0006281 | Biological Process | DNA repair | Interproscan |
| GO:0007131 | Biological Process | reciprocal meiotic recombination | Interproscan |
| GO:0008821 | Molecular Function | crossover junction DNA endonuclease activity | Interproscan |
| GO:0033063 | Cellular Component | Rad51B-Rad51C-Rad51D-XRCC2 complex | Interproscan |
| GO:0033065 | Cellular Component | Rad51C-XRCC3 complex | Interproscan |
| GO:0140664 | Molecular Function | ATP-dependent DNA damage sensor activity | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K10870 | RAD51L2, RAD51C; RAD51-like protein 2 | - | Homologous recombination | ko03440 | PMID: 28812709 |
| Fanconi anemia pathway | ko03460 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_53773-3.12 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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