Gene detail

Detailed information of Bpl_scaf_53568-7.38 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_53568-7.38	DYNEIN ASSEMBLY FACTOR 4, AXONEMAL	Bpl_scaf_53568	758570	772918	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

Bpl_scaf_53568-7.38

GTTTGATTGGACAGTTACATTGTTATGCAAACACTGATTGGTTGTCAAAACTGACATGGAGGACATTTGTTAGGAATATATCGTGTTTGTTCTTGTGGAATTTGATTTAAAAAATATTCGTAAATACACAAAAAATCAAAGGTTTTATTGAAAGGAATAAGATGCCTCTTTTAATTCGCGACTATACGTGGGATGAAACGGAGAAGATGGTATTTATAACCGTTCCGTTGAAAGGTGTACGTGCCCACAAAGTTGATCTTCTGTCTTCAGAAGAATTTATTAAGGTCAGTTTTCCACCTTATCTGTTTGAGTGTTTATTGTATGCTCCAGTGGATGACCAAGCAAGCACAGCCCAAATAGGAAATGGAGCTGTTGTGTTCAAACTTAAGAAACAGGAAGCTGGCATGTGGTTACAGTTGACTAAAGAGGAAGCAGGTAAGAAACAGGAACCTGGCATGTGGTTACAGTTAACTAAAGATGAAGCAGGTAAGAAACAGGAACCTGGCATGTGGTTACAGTTAACTAAAGATGAAGTAGGTAAGAAACAGGAACCTGGCATGTGGTTACAGTTAGCTGAAGATGAAGTAGATAATAAAAATATCATAAAACAGAAGAAAGAAGAAGCCATTCAGAAAAACCAGGAAAGAGCAGAACAGGAAAGGAAAGAGAAAGCTGAGAATAAGAGAAAATCAGAGAAATATACCATCAATGAAATGATGAAGATTGAGGATATGGATAGAGATAGAATAAACAATATCAAAGAGAATGAGAGAAAAACCGCAACTGAAGATTTAGAACAATGGAAAGAAGAACAGAAAAGGATGGCAGAACTGGAAAGACAAAGGATATTGGAGGAAAAGATGGCAGAGGAAACAAGAAAAAAGGATGAAGAAAGGAAGAAAAGAAAAAAGAAGGGTAAAAATATCTTTGAAGAATCAGCAGAAGGTGTTCCTAGAAGAGAAGTTGGTAAAATTGAAGTGAAATTTACTCCAAGATGGTTGAAAAAACAAGCAGAAAGAAGACAAGCTATAGATATAAAGGATGCCGATTTGACAGAGGAAGAAAAGAATCCAGTGTTCCTCAGAGACAAGGGGAATGATTTCTTCAAAGCAGGGAATTATCAATCTGCCGTTAATGCTTATTCAACAGCTATTAGATATAGTCCACAGCTACCATCATTGTATTCAAACAGAGCTGCTTGTCACCTGAAGCTGAGAAATTTCTTCAAAGCAATAGAAGACTGTTCAAAGAATGCTGCTAGTCGAGTAAAAGCTTTAGTTAGGAAAGGAACAGCTTTCTGTCAACTGGAGCTGTATGTTGAAGGATTACAAGATTATGAGTGTGCACTGAAAATTGATCCAAACAATGAACAATTAAAAGCTGATGCTGATAAAATTAGAGAAATAATTCAAAGTAGTACAGGAAGTTGATAAGATGTTAAAGACTAGTGTTATAATACAATCTAGACCCAATACAGTGGCCGTGGGCAGATGCATATAATGGGTTAAGATCAAAAACCAAGTTTCAAAAATATGTATGCTTTAAAGAAGAAAATAATGGAAAGTCAAGCATATTTGCAAGAATTTTCAATTTTGATTGTTAATTTAATTTTTTAAAACATGCTAAAAATTAAAATATGTTAATTTATTGAGAAAGGATTCATATCAGAGAAAAGTATAAACTATTTTCTCCCATTATTACAGCGTTTTAACAGTGGTGGAAAAATCTGTAATCCTCTAGAGGATTAAAATGTCTCGTGCCTTTCCCCACATTATTTTCAAACGCATTAATTTCAAATTTTGAAATAAACTTTGTGTTAAATAATGGGAGAAACAAATTTTCCTTCAGTTGCCCATGTGGGTTACGATATTTCTCCACTCTCGAGAGTTAAATTTAAAATTTGAACCACTCGCCTGACGGCTTGTGGTTAAAACTTTAAATTTAACTCTCTTGAGTGGAGAAATATCGTAACCCACGGGCAACTGAAGGAGAATCTATATGTAAAAAATTTCCATCATGAATAATGAATAATACAATTGCTTTTTGAACAGATATGATGAAAAATTGTGAGATTTTAAAACTAATTTCTGTTGATTTACATACCTAAATGATGTAGACTGGAGTAAATAGGTG

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04969	CS	CS domain	Domain	Interproscan
PF13414	TPR_11	TPR repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR007052	Domain	CS domain	Interproscan
IPR008978	Homologous_superfamily	HSP20-like chaperone	Interproscan
IPR011990	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR019734	Repeat	Tetratricopeptide repeat	Interproscan
IPR037894	Domain	Dynein axonemal assembly factor 4, CS domain	Interproscan
IPR052004	Family	Axonemal Dynein Assembly Factor 4	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46492	DYNEIN ASSEMBLY FACTOR 4, AXONEMAL	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003341	Biological Process	cilium movement	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0036158	Biological Process	outer dynein arm assembly	Interproscan
GO:0036159	Biological Process	inner dynein arm assembly	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K19758	DNAAF4, DYX1C1; dynein axonemal assembly factor 4	-	Cilium and associated proteins	ko03037	PMID: 28812709

Expression pattern

1. Expression trend for Bpl_scaf_53568-7.38 global RNA-seq network