| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_53185-12.12 | NETRIN/LAMININ-RELATED | Bpl_scaf_53185 | 1157447 | 1215741 | - |
| CDS | |||||
| Bpl_scaf_53185-12.12 | |||||
| Transcript |
| Bpl_scaf_53185-12.12 |
| Protein |
| Bpl_scaf_53185-12.12 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00052 | Laminin_B | Laminin B (Domain IV) | Domain | Interproscan |
| PF00053 | Laminin_EGF | Laminin EGF domain | Domain | Interproscan |
| PF00055 | Laminin_N | Laminin N-terminal (Domain VI) | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000034 | Domain | Laminin IV | Interproscan |
| IPR000742 | Domain | EGF-like domain | Interproscan |
| IPR002049 | Domain | Laminin-type EGF domain | Interproscan |
| IPR008211 | Domain | Laminin, N-terminal | Interproscan |
| IPR050440 | Family | Laminin/Netrin Extracellular Matrix | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR10574 | NETRIN/LAMININ-RELATED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005604 | Cellular Component | basement membrane | Interproscan |
| GO:0009887 | Biological Process | animal organ morphogenesis | Interproscan |
| GO:0009888 | Biological Process | tissue development | Interproscan |
| GO:0034446 | Biological Process | substrate adhesion-dependent cell spreading | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K05635 | LAMC1; laminin, gamma 1 | - | PI3K-Akt signaling pathway | ko04151 | PMID: 28812709 |
| ECM-receptor interaction | ko04512 | PMID: 28812709 | |||
| Focal adhesion | ko04510 | PMID: 28812709 | |||
| Pathways in cancer | ko05200 | PMID: 28812709 | |||
| Small cell lung cancer | ko05222 | PMID: 28812709 | |||
| Prion diseases | ko05020 | PMID: 28812709 | |||
| Human papillomavirus infection | ko05165 | PMID: 28812709 | |||
| Amoebiasis | ko05146 | PMID: 28812709 | |||
| Toxoplasmosis | ko05145 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_53185-12.12 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-Yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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