| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_53108-4.12 | NEP1/MRA1 | Bpl_scaf_53108 | 407132 | 427190 | - |
| CDS | |||||
| Bpl_scaf_53108-4.12 | |||||
| Transcript |
| Bpl_scaf_53108-4.12 |
| Protein |
| Bpl_scaf_53108-4.12 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF03587 | EMG1 | EMG1/NEP1 methyltransferase | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR005304 | Family | Ribosomal biogenesis, methyltransferase, EMG1/NEP1 | Interproscan |
| IPR029026 | Homologous_superfamily | tRNA (guanine-N1-)-methyltransferase, N-terminal | Interproscan |
| IPR029028 | Homologous_superfamily | Alpha/beta knot methyltransferases | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR12636 | NEP1/MRA1 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005730 | Cellular Component | nucleolus | Interproscan |
| GO:0019843 | Molecular Function | rRNA binding | Interproscan |
| GO:0032040 | Cellular Component | small-subunit processome | Interproscan |
| GO:0070037 | Molecular Function | rRNA (pseudouridine) methyltransferase activity | Interproscan |
| GO:0070475 | Biological Process | rRNA base methylation | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K14568 | EMG1, NEP1; rRNA small subunit pseudouridine methyltransferase Nep1 | EC:2.1.1.260 | Ribosome biogenesis in eukaryotes | ko03008 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_53108-4.12 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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