| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_52954-2.17 | F-BOX ONLY PROTEIN | Bpl_scaf_52954 | 165340 | 196943 | - |
| CDS | |||||
| Bpl_scaf_52954-2.17 | |||||
| Transcript |
| Bpl_scaf_52954-2.17 |
| Protein |
| Bpl_scaf_52954-2.17 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | E3|E3 adaptor Cullin RING|F-box |
| Ubiquitin Family | E3|E3 activity|UBR-box |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF02207 | zf-UBR | Putative zinc finger in N-recognin (UBR box) | Family | Interproscan |
| PF12937 | F-box-like | F-box-like | Domain | Interproscan |
| PF13229 | Beta_helix | Right handed beta helix region | Repeat | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001810 | Domain | F-box domain | Interproscan |
| IPR003126 | Domain | Zinc finger, UBR-type | Interproscan |
| IPR006626 | Repeat | Parallel beta-helix repeat | Interproscan |
| IPR006633 | Domain | Carbohydrate-binding/sugar hydrolysis domain | Interproscan |
| IPR011050 | Homologous_superfamily | Pectin lyase fold/virulence factor | Interproscan |
| IPR012334 | Homologous_superfamily | Pectin lyase fold | Interproscan |
| IPR022441 | Repeat | Parallel beta-helix repeat-2 | Interproscan |
| IPR036047 | Homologous_superfamily | F-box-like domain superfamily | Interproscan |
| IPR039448 | Domain | Right handed beta helix domain | Interproscan |
| IPR047504 | Domain | F-box only protein 11, UBR-box | Interproscan |
| IPR047505 | Domain | F-box only protein 11, F-box domain | Interproscan |
| IPR051550 | Family | SCF Complex Subunits and Alginate Epimerases | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR22990 | F-BOX ONLY PROTEIN | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0006511 | Biological Process | ubiquitin-dependent protein catabolic process | Interproscan |
| GO:0008270 | Molecular Function | zinc ion binding | Interproscan |
| GO:0042981 | Biological Process | regulation of apoptotic process | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K10297 | FBXO11; F-box protein 11 | - | Ubiquitin system | ko04121 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_52954-2.17 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-Yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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