Gene detail

Detailed information of Bpl_scaf_5295-5.4 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_5295-5.4	ATPASE H+-TRANSPORTING V1 SUBUNIT E1A-RELATED	Bpl_scaf_5295	513781	540047	+

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

Bpl_scaf_5295-5.4

GAAAATTGACGATACAGCCCTATTCCGATCCGTTTCAGTATATTGATCTACTCATTACACATTACTTTTATTTGTGTTATTACATAGAAAATCTAATGCTAAATATGTTTCCTGTTTACCGATTACTTTAGACAAATATGTTCTTCAGATTCATGCATATCTAAGGCACACATTTCTGTCAACTGATCTAATTCTGTATTCTAAACTTGTAGAAAACTTTGGTCACTTTTACCGGAAGTTGAGATATTGTGTAAAACGTCATCGATTTTTGGGAACAACAATCACGAGATTATTGACGGTCTTCCATATAGTCAGTCCTCAGCTTTTATAAAAACGATAAAAGATGGCTCTCAGCGATGCAGATGTACAAAAGCAGATAAAGCATATGGTTGCATTTATTGAGCAAGAGGCCAATGAAAAAGCAGAAGAAATTGATGCGAAGGCTGAAGAAGAATTCAATATAGAAAAGGGACGACTTGTTCAACAGCACAGAGTAAAGATCATGGAGTATTATGAGAAAAAAGAAAAACAAGTTGAATTACAAAAGAAAATCCAAAACTCCAATTTATTGAATCAGTCCAGATTAAAAATTTTGAAAGCAAGAGAAGATCAATTAAAGGAACTTTTAGAAGAAGCAAGAACAAAACTTCACACAATTTCAAAAGACAAGGCTAAATACAGGAAATTGTTAGAAGGATTAATGACACAGGGATTATTCCAGCTTCTAGAATCCAAAGTGTCAATCATGTGTAAACCAGAAGATGTTGGTGTTGTTCAGGAATTACTTCCAACAATTACAAAAAAATATAAAGAGAAGACAAAGAAAGATGTCAGTGTCACAATAGATCCAGACAATAAATTGGGTCCTGACATATCTGGTGGTATTGTACTTTTGGCTTGCAACAACAAATTGAGAGTGGAGAACACATTAGAAACTAGATTAGATTTAATTAGTCAACAGATGGTGCCAGAATTAAGGAATATATTATTTGGAAAGAATCCAAACAGGAAGTTTATGGATTAAAGATTTAGATGTTTTAGTTAACATTCCATGACTGTTATTTGCATAGACAGGACAGTACTAGTCAATAATTTTACACAGATATTTGTGTAGTGAATTTTCTCAAAACTTGCAAGCTGGTAGTTCATTCTTATCTGTGTTGAGAAAATGAGCAGTTTGTTTTATGATTATTCTTTTTTGCTGAATTATTGTCTTTTACTTAGCTAGTGTCAGTATTTTATTCGGAATATTGTTATTTCATTCTGTATGAAGTTCTAGGGAAAGAACTGTACATGTGGAAATTTTAAGTGTTTGCAGTTGAGAATCATATACAAATTACATTAAATAACATACATAGTGCAATATACATGTACCAACAAGACAGATACACTGGAATTATACCCAAGATAAATATTATCTAGTTGGAATAATGAGAATATCCTCTCATAAAAGTAATCATGCTTATAGTTGATTGATTGATTGGTGTTTAATGCCAACTTAGCAGTATTTCAGCTATATCGTGGTGCATACTTAAAGTTGAATCTTATTATGTCAAATTCAGTTTACTCGAAATTTCGGTTAAGTCAAATTTTTCTGAAGTCCCACTCTGTTCAGAATAACATTTCAACATTTTGTCAGGTTGCTGATCAGCTTTTACAATAGAATAATGAAAGATATTTTTTATTTGTGTTCAATTACGTGGTATTTATAGATTTCTATGGAATTTGGTTTTGTTGAGAGTTTCGTAATTTTTAAATACACGATTGTGTATTGCTGTATTATGTATGTACATGATGTAATCGAATGCATGTTTCTTTTTTCTATTAAAGGTTCCTGAGAATTATTGAATTCAGATAATAACACCTCATCAGAGAATCTTTTTGTTAATTTTTTTTTTAAATCAATATTTACACACGTGTTAAGAAATATTTCTCTAATTCTTGTTCAATTTTCACACTTCTCAACCCGTGTGAAAAGAAATTGATGATCAACGTGTGGATCACTTTGTTCTCAATCGCTGATTGGTCAATTATGCAATTACGTAATTTTCTATGCTCATCTCAGCAACATTTAAAAAATGTAAACAAATTACGATTTATGAAATATTAAAAAATGTCAGATATCCTTGTCTGAGATTTTCCGTCTGGCCCTCTTACCGGTGTTTGATTCTTTTTCTCACTAATATTTTATTGAAAGTACTGTATTTTCCTTCATGAGACACCCCATACATGAAATATGACGTGACACATATTTTGACGTCATTGAAGAATGACGCCAAAGGTACGGAAAAGGACATCTAGAAATACGAAAAAATGAAAATAAGACACAAATATATTTAATACGGTTGGATTCTGTATTTAAAAAAACAATGGTTAAATCCGTAATATATCTGTTATTCAGCTATCAGACAGGGTATATAATGTGACATTCCCGGCTTAGGATATAGATCCTTTAAAACTCAAAAAACTTGAAAGTTTAAAGATGAATATGATTCTATGTTACTAAATTTACATTATATATGTATCAATGTGATAATTAATTTCTCAGATAGAAATGTACATTGTTAGGTAATCTATGTATAGTAAAGGTATCATTCGACAGTTTTTGTGTTTTAATTATTGGTCAGAATAGTTATCAGAGGTAAAAAAAAAAAAAAAAAATCATTATCACCGAAATCTGGACTATTAGCATGGTGATACTCTCAGGCAATATCAGTTCACAAGGGCCTGATTGTTCAAAATACTGGATAAAGTAATCCACCTTATAACTTGTTTTCCAAACAGTTGTTGAAAGGCAAAGACAAAGGTTGGCTAGCTATGTGAACTACTTTTGAATATCAACCTTGTTAATTTATCCAAAAAAAAAAAGTTGATCAGCTTTTGTTACACTGACTTTTCTGTAGTCTAAATTTAGCAGCATCACATATTTATTAATTCTACTGTTATCGATAAGCTTTAGTGATAAAGGTGGAATTCACAATCTTGGCTTCTGACTGAGTGTGGAAGGCAACACACATTATTTACGTTATATGTGTTTGTTTGCTTATAGTGGTGTCCATCAAATATTGTGTTGTGCTTTTGTTTTAGTTTCATTCGTCTTGTGTACACAGGGGCCCGGGTGGCTCAATGAGTTAGGTCGCTGGATCTAACAATTCATACAAGCCTATCACCAATACGACGTGGGTTCGCGCCCAGCTTTGTAAATTACAAAAAAG

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01991	vATP-synt_E	ATP synthase (E/31 kDa) subunit	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002842	Family	V-type ATPase subunit E	Interproscan
IPR038495	Homologous_superfamily	V-type ATPase subunit E, C-terminal domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45715	ATPASE H+-TRANSPORTING V1 SUBUNIT E1A-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0033178	Cellular Component	proton-transporting two-sector ATPase complex, catalytic domain	Interproscan
GO:0046961	Molecular Function	proton-transporting ATPase activity, rotational mechanism	Interproscan
GO:1902600	Biological Process	proton transmembrane transport	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K02150	ATPeV1E, ATP6E; V-type H+-transporting ATPase subunit E	-	Oxidative phosphorylation	ko00190	PMID: 28812709
			mTOR signaling pathway	ko04150	PMID: 28812709
			Phagosome	ko04145	PMID: 28812709
			Collecting duct acid secretion	ko04966	PMID: 28812709
			Synaptic vesicle cycle	ko04721	PMID: 28812709
			Rheumatoid arthritis	ko05323	PMID: 28812709
			Vibrio cholerae infection	ko05110	PMID: 28812709
			Epithelial cell signaling in Helicobacter pylori infection	ko05120	PMID: 28812709

Expression pattern

1. Expression trend for Bpl_scaf_5295-5.4 global RNA-seq network