Gene detail

Detailed information of Bpl_scaf_52809-6.18 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_52809-6.18	CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED	Bpl_scaf_52809	725891	768825	+

Gene Structure

More details in Jbrowse Sequence

CDS

Bpl_scaf_52809-6.18

ATGTCTGAAGGCGAATGTGTAAAGGTAATTGTAAGATGTCGTCCCATGAACGAAAGAGAGAACAATTTAAAATGTAAGCCATGCTTGACAATGGAGAGCAAAAGGGGACAATGCACGATAAAGAACCCAAATGATCCAAAAGCTCCTCCCAAGTTGTTCACTTTTGATGGTGCCTACTATACAGATTCTACAACAGAAAATATTTACAACGAAATAGCCTACCCTTTAGTAGAGGGAGTTTGTGAAGGATACAATGGTACCATCTTTGCCTATGGACAGACAGGATGTGGTAAATCATTCTCCATGCAGGGAATTGTGAATCCAGCAACACAGAGGGGTATTATACCAAGAGCTTTTGACCATATTTTTGAGACTGTGTCAGTAGTAGAAGGTACCAAATACTTGTTACATGCCTCATACTGTGAAATCTACAATGAGGAAATAAGAGATTTACTTGGTAAAGACGTGAAAGCTAAATTAGATTTACATGAACATCCAGAGAAAGGAGTCTATGTCAATGGTTTATCTATGCATTCTGTACACAGTGTACACGACTGTGAAAAGGTCATGGAAAAAGGTTGGAAAAATCGTGCCACAGGAGCAACTCTGATGAATGCTGATTCGTCACGTAGTCATTCCATATTTACAATTAGTCTTGAAATGAGTACTCAAGATGAGGCTGGGGAAGATCATATACGAGCTGGAAAACTTAATCTTGTAGATTTAGCTGGTAGTGAAAGGCAGGCTAAAACAGGAGCGACTGGGGACAGACTGAAAGAGGCTACGAAGATTAATTTATCATTATCAGCCTTGGGTAATGTAATATCGGCCCTCGTTGACGGGAAATCTAAACACATTCCTTACAGAGACTCAAAATTGACACGTTTGTTACAAGATTCACTCGGAGGTAATACAAAAACACTTATGGTCGCTTGTCTTTCTCCTGCTGATAATAATTATGATGAAACTCTTAGTACGTTGAGATACGCTAACCGTGCCAAGAACATCCAGAACAAACCCAAGATCAATGAGGATCCTAAGGATGCACTGCTGCGACAATACCAGGAGGAGATTGAGAAATTAAAGGCAATGCTAGCAGGAAAAATCCCTGTACAAGGTGAACCTTCCACTTCAGATACCAGTCAGACAGGACTTAGTAGAGAAGATTTGGAGGATGAAAAGGATAGGATTAGAGAGGAATATGATGCAAAACTTCAGGACATGAAAAGTGAATTTGAGACTGAAAAAACATCAAAGGCTAAACTACAGCAAGATATGCTTAAATTACGGGCATTTTATGACAACAAATTGTCTAATGTTGAAGGACAAATTGCTGATCTGCCACCAACTGCAGCAGTCTTAGGCGAGATAGAATGGCGAGACGAAGATGGAAACAAGGCTGAACACAAGGCTGCTGGTAGAAAAGGGCAACGGAAAGTTTCATCAACGTCCGAAGTCAATGGCGAGGTAATTACGGGAGAAGTTATCGAACCATCAGAAGATGGAACGACCACCATACAACAACCAGACGGTAAAGTGGTAGTAATACCCGCTGGAGTGACTGCTGTGAAACAGCCAGACGGCACTATTGTACAGGTACCGGAGGGGAACACAACAATTACCCAGCCTGATGGGACTGTAGCTGTTGTTCCTGAGGGAACTAAAATTATTTATAAGAACACCACTAATACAGAATATATTATTAAGACTGAATATATAGAGAAGGAAGGAAAGGGACAGGATCGTCCTTCATCTGTCATGGGACAGGTCTTACCATCAGGTCCTGATGTTGCAGCTATGAAGATGGGTGGGACTAATCAAGGTGAAGGAGAAGAAGCTGTAACTGCTGTGATGGTAGATGGTGTACCTATGTTAGAACATGATGAGGGTCTAGTGGCTCCAAGCTCTTCTCCAACACAGACTAACATGCAGGAACAACTAAAACATCAGCAACAAGAAGCTTTAAAGAGATTGCAAGAGTTGGAAAGACAGATGGTTGGTGGAGAGCAATGTGACAATGAAGAAATGAGAGAAAGAAGGAAAAACAGACAACTTCTGGCAGATGAAAGGAAAGAAAGACTGATGGAGGCTATAGCCAATATGGATGACGACTTTATTATGTTGGAGATTTATGATGATACTCAATCTGAATTACAAGCTAAAAATAAAATTCTTGAAAAAGAAAAAGAAAAGTCTGCATCTCTAGAAAGAGACATTATAGACATTCAGTCAGAGTTTCAGTTTGAAAGAATAGATTATCTTGATACGATTCGTAAACAAGAAAGACAACTCCTCCTGTTAGAAGGATTGTTGGACAAGATTCATCCATGTTTAAGGAGAGACTGTAATTATGCAAATATTGACAAAGTGAAGAAAGAATGCAAATGGGAAGAGGATGCTGGGAAATGGATTTTTCCAAGAATGCAAATCAGCAATACAGCACTGCCAGTTGCAGGCCAAAATCAGGCAATGGATAGAAAAGGAATGCCTGATCAAGAGGGTATCATGCCAGGAGCAAGAATTAGTAATCCACACAGTAGATCACGACCTGTTTTGAATAATGAGGTCAATGCTAGTATCTATGACAATGAAGAGGACCGCTACAGAGATACATTACACAACAAACATGATACGTCATCAGACTATTTTGAAAATAAGAGGGTGAAAAAGTACCTTAATAATCAACCTGTACAAAGAACAAATATGTTAGAAGTCAAACAAAGTATACACAAACCGACATCAATGCCAGTTACGAATGGTTTTGGTAAGCATGATTCCATGAGCAATGGATTACGAGCAGCTGCTGTACATGGTCAGCTGATTTCACAAGAAAACGATCCAATGGTACGAAAGCCAACACGACTGGATGCATTACAACCGATCGGTGGAAAGAGAGGAAAGAAGAAGAGGAATGAATTAGAGCCGTTGTGA

Transcript

Bpl_scaf_52809-6.18

CTGTGGAGGAAGGAGCTGAGAAATGAACGTTATACTAAAATGAATTAATAATTATTTCTCAAAGGGTTTTGTTAGAAGTTTCAGCTTGACAATTATTTAGCTTTAGTTGTGAATTAAATTGCCATTGAATACAATCTTCAAATACCAGCAAAATGTCTGAAGGCGAATGTGTAAAGGTAATTGTAAGATGTCGTCCCATGAACGAAAGAGAGAACAATTTAAAATGTAAGCCATGCTTGACAATGGAGAGCAAAAGGGGACAATGCACGATAAAGAACCCAAATGATCCAAAAGCTCCTCCCAAGTTGTTCACTTTTGATGGTGCCTACTATACAGATTCTACAACAGAAAATATTTACAACGAAATAGCCTACCCTTTAGTAGAGGGAGTTTGTGAAGGATACAATGGTACCATCTTTGCCTATGGACAGACAGGATGTGGTAAATCATTCTCCATGCAGGGAATTGTGAATCCAGCAACACAGAGGGGTATTATACCAAGAGCTTTTGACCATATTTTTGAGACTGTGTCAGTAGTAGAAGGTACCAAATACTTGTTACATGCCTCATACTGTGAAATCTACAATGAGGAAATAAGAGATTTACTTGGTAAAGACGTGAAAGCTAAATTAGATTTACATGAACATCCAGAGAAAGGAGTCTATGTCAATGGTTTATCTATGCATTCTGTACACAGTGTACACGACTGTGAAAAGGTCATGGAAAAAGGTTGGAAAAATCGTGCCACAGGAGCAACTCTGATGAATGCTGATTCGTCACGTAGTCATTCCATATTTACAATTAGTCTTGAAATGAGTACTCAAGATGAGGCTGGGGAAGATCATATACGAGCTGGAAAACTTAATCTTGTAGATTTAGCTGGTAGTGAAAGGCAGGCTAAAACAGGAGCGACTGGGGACAGACTGAAAGAGGCTACGAAGATTAATTTATCATTATCAGCCTTGGGTAATGTAATATCGGCCCTCGTTGACGGGAAATCTAAACACATTCCTTACAGAGACTCAAAATTGACACGTTTGTTACAAGATTCACTCGGAGGTAATACAAAAACACTTATGGTCGCTTGTCTTTCTCCTGCTGATAATAATTATGATGAAACTCTTAGTACGTTGAGATACGCTAACCGTGCCAAGAACATCCAGAACAAACCCAAGATCAATGAGGATCCTAAGGATGCACTGCTGCGACAATACCAGGAGGAGATTGAGAAATTAAAGGCAATGCTAGCAGGAAAAATCCCTGTACAAGGTGAACCTTCCACTTCAGATACCAGTCAGACAGGACTTAGTAGAGAAGATTTGGAGGATGAAAAGGATAGGATTAGAGAGGAATATGATGCAAAACTTCAGGACATGAAAAGTGAATTTGAGACTGAAAAAACATCAAAGGCTAAACTACAGCAAGATATGCTTAAATTACGGGCATTTTATGACAACAAATTGTCTAATGTTGAAGGACAAATTGCTGATCTGCCACCAACTGCAGCAGTCTTAGGCGAGATAGAATGGCGAGACGAAGATGGAAACAAGGCTGAACACAAGGCTGCTGGTAGAAAAGGGCAACGGAAAGTTTCATCAACGTCCGAAGTCAATGGCGAGGTAATTACGGGAGAAGTTATCGAACCATCAGAAGATGGAACGACCACCATACAACAACCAGACGGTAAAGTGGTAGTAATACCCGCTGGAGTGACTGCTGTGAAACAGCCAGACGGCACTATTGTACAGGTACCGGAGGGGAACACAACAATTACCCAGCCTGATGGGACTGTAGCTGTTGTTCCTGAGGGAACTAAAATTATTTATAAGAACACCACTAATACAGAATATATTATTAAGACTGAATATATAGAGAAGGAAGGAAAGGGACAGGATCGTCCTTCATCTGTCATGGGACAGGTCTTACCATCAGGTCCTGATGTTGCAGCTATGAAGATGGGTGGGACTAATCAAGGTGAAGGAGAAGAAGCTGTAACTGCTGTGATGGTAGATGGTGTACCTATGTTAGAACATGATGAGGGTCTAGTGGCTCCAAGCTCTTCTCCAACACAGACTAACATGCAGGAACAACTAAAACATCAGCAACAAGAAGCTTTAAAGAGATTGCAAGAGTTGGAAAGACAGATGGTTGGTGGAGAGCAATGTGACAATGAAGAAATGAGAGAAAGAAGGAAAAACAGACAACTTCTGGCAGATGAAAGGAAAGAAAGACTGATGGAGGCTATAGCCAATATGGATGACGACTTTATTATGTTGGAGATTTATGATGATACTCAATCTGAATTACAAGCTAAAAATAAAATTCTTGAAAAAGAAAAAGAAAAGTCTGCATCTCTAGAAAGAGACATTATAGACATTCAGTCAGAGTTTCAGTTTGAAAGAATAGATTATCTTGATACGATTCGTAAACAAGAAAGACAACTCCTCCTGTTAGAAGGATTGTTGGACAAGATTCATCCATGTTTAAGGAGAGACTGTAATTATGCAAATATTGACAAAGTGAAGAAAGAATGCAAATGGGAAGAGGATGCTGGGAAATGGATTTTTCCAAGAATGCAAATCAGCAATACAGCACTGCCAGTTGCAGGCCAAAATCAGGCAATGGATAGAAAAGGAATGCCTGATCAAGAGGGTATCATGCCAGGAGCAAGAATTAGTAATCCACACAGTAGATCACGACCTGTTTTGAATAATGAGGTCAATGCTAGTATCTATGACAATGAAGAGGACCGCTACAGAGATACATTACACAACAAACATGATACGTCATCAGACTATTTTGAAAATAAGAGGGTGAAAAAGTACCTTAATAATCAACCTGTACAAAGAACAAATATGTTAGAAGTCAAACAAAGTATACACAAACCGACATCAATGCCAGTTACGAATGGTTTTGGTAAGCATGATTCCATGAGCAATGGATTACGAGCAGCTGCTGTACATGGTCAGCTGATTTCACAAGAAAACGATCCAATGGTACGAAAGCCAACACGACTGGATGCATTACAACCGATCGGTGGAAAGAGAGGAAAGAAGAAGAGGAATGAATTAGAGCCGTTGTGATTAAGACAGTATTTAGACATTGGGTAATGTTGCAATCAACCAAATATTTATTAAAGGAGATTTTATTTTGTTTGCCATTCTGACTATATGTCTCTTTTTTTTTAGTGTATATTTTCAGTTTAGCAGCATAATAATTTTATTAAAAGTAGGTTTGTGCAAAATGATTTAGGAAAACAATTTGAAATATAAGAAAAATTTAAAGGTTCTAAAAATTGAATTGTAAATATTTTAAAAACATTATGTTATTTTTTAGCGGAGTTGCGACGAAGTCGAACTCGGCTTATAATATGATGAATGGCATCCTGGCATCTGTAAAATGTGGTGTGGTGAAAATTTATTGCCTCATTTTTCTTGTGACATTCTGAGAAACTGTCTTCTGACATTTTTAGGAACTGCCTTCTGACGTTTTAATGAGTTATCTTTAAATGCTATAAAGTATCAATACATGATATAAGTTGTTATGTAGTCTTTTTCTTAAATTTAAATGTGCAATTATAGTCTTAAAAGGGTTTTTTTAACTTCACAAATGCAATCAGTATTGACTACAAGATATTTAACTGTGGTATTGTGAAGAATATTTGTAAAGACATATATATGTACAGTGTACATGAGGAGTAACTCCAAGAATGTGACAACTTAATGTCAGGGAAATGTAACTTGGACATCATATATATTGACAATTTTAAACATTGCCGAGAGAGACATGTTGATTCACAGATAAAATATTTCGACATACTGAGAATAAACAAATACTAGTAGTCTCAACTTATCAATTCATATTTTATATGTGTGTATTGTGTAAGAATATAATTTTTTGTTAACACATGACATATCGTTAACACACATG

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00225	Kinesin	Kinesin motor domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001752	Domain	Kinesin motor domain	Interproscan
IPR019821	Conserved_site	Kinesin motor domain, conserved site	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR027640	Family	Kinesin-like protein	Interproscan
IPR036961	Homologous_superfamily	Kinesin motor domain superfamily	Interproscan
IPR047002	Homologous_superfamily	T-complex protein 10, C-terminal domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47969	CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003777	Molecular Function	microtubule motor activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0005875	Cellular Component	microtubule associated complex	Interproscan
GO:0007018	Biological Process	microtubule-based movement	Interproscan
GO:0007052	Biological Process	mitotic spindle organization	Interproscan
GO:0008017	Molecular Function	microtubule binding	Interproscan
GO:0051231	Biological Process	spindle elongation	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K10394	KIF3A; kinesin family member 3A	-	Hedgehog signaling pathway	ko04340	PMID: 28812709

Expression pattern

1. Expression trend for Bpl_scaf_52809-6.18 global RNA-seq network