| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_52347-0.9 | HOST CELL FACTOR | Bpl_scaf_52347 | 11252 | 49062 | + |
| CDS | |||||
| Bpl_scaf_52347-0.9 | |||||
| Transcript |
| Bpl_scaf_52347-0.9 |
| Protein |
| Bpl_scaf_52347-0.9 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF01344 | Kelch_1 | Kelch motif | Repeat | Interproscan |
| PF13415 | Kelch_3 | Galactose oxidase, central domain | Repeat | Interproscan |
| PF13854 | Kelch_5 | Kelch motif | Repeat | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR003961 | Domain | Fibronectin type III | Interproscan |
| IPR006652 | Repeat | Kelch repeat type 1 | Interproscan |
| IPR013783 | Homologous_superfamily | Immunoglobulin-like fold | Interproscan |
| IPR015915 | Homologous_superfamily | Kelch-type beta propeller | Interproscan |
| IPR036116 | Homologous_superfamily | Fibronectin type III superfamily | Interproscan |
| IPR043536 | Family | Host cell factor | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR46003 | HOST CELL FACTOR | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003713 | Molecular Function | transcription coactivator activity | Interproscan |
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0006338 | Biological Process | chromatin remodeling | Interproscan |
| GO:0006355 | Biological Process | regulation of DNA-templated transcription | Interproscan |
| GO:0035097 | Cellular Component | histone methyltransferase complex | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K14966 | HCFC; host cell factor | - | Longevity regulating pathway - worm | ko04212 | PMID: 28812709 |
| Herpes simplex infection | ko05168 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_52347-0.9 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
© 2024 All Rights Reserved.
