| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_52314-3.18 | TRANSCRIPTION INITIATION FACTOR IA RRN3 | Bpl_scaf_52314 | 281780 | 302584 | - |
| CDS | |||||
| Bpl_scaf_52314-3.18 | |||||
| Transcript |
| Bpl_scaf_52314-3.18 |
| Protein |
| Bpl_scaf_52314-3.18 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF05327 | RRN3 | RNA polymerase I specific transcription initiation factor RRN3 | Repeat | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR007991 | Family | RNA polymerase I specific transcription initiation factor RRN3 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR12790 | TRANSCRIPTION INITIATION FACTOR IA RRN3 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0001042 | Molecular Function | RNA polymerase I core binding | Interproscan |
| GO:0001181 | Molecular Function | RNA polymerase I general transcription initiation factor activity | Interproscan |
| GO:0005634 | Cellular Component | nucleus | Interproscan |
| GO:0006361 | Biological Process | transcription initiation at RNA polymerase I promoter | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K15216 | RRN3, TIFIA; RNA polymerase I-specific transcription initiation factor RRN3 | - | Transcription machinery | ko03021 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_52314-3.18 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-Yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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