Detailed information of Bpl_scaf_52189-3.4 in Gigantidas platifrons Gene info
Gene IDAnnotationScaffoldStartEndStrand
Bpl_scaf_52189-3.4AMINOTRANSFERASE CLASS VBpl_scaf_52189286255300182+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00266Aminotran_5Aminotransferase class-VDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000192DomainAminotransferase class V domainInterproscan
IPR015421Homologous_superfamilyPyridoxal phosphate-dependent transferase, major domainInterproscan
IPR015422Homologous_superfamilyPyridoxal phosphate-dependent transferase, small domainInterproscan
IPR015424Homologous_superfamilyPyridoxal phosphate-dependent transferaseInterproscan
IPR020578Binding_siteAminotransferase class-V, pyridoxal-phosphate binding siteInterproscan
IPR024169FamilySerine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminaseInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR21152AMINOTRANSFERASE CLASS VInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0004760Molecular FunctionL-serine-pyruvate transaminase activityInterproscan
GO:0005777Cellular ComponentperoxisomeInterproscan
GO:0008453Molecular Functionalanine-glyoxylate transaminase activityInterproscan
GO:0019265Biological Processglycine biosynthetic process, by transamination of glyoxylateInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K00830AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminaseEC:2.6.1.44
EC:2.6.1.45
EC:2.6.1.51
Carbon metabolism ko01200PMID: 28812709
Glyoxylate and dicarboxylate metabolism ko00630PMID: 28812709
Methane metabolism ko00680PMID: 28812709
Alanine, aspartate and glutamate metabolism ko00250PMID: 28812709
Glycine, serine and threonine metabolism ko00260PMID: 28812709
Peroxisome ko04146PMID: 28812709

Expression pattern
 1. Expression trend for Bpl_scaf_52189-3.4 global RNA-seq network
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