| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_52001-5.54 | UBIQUITIN-CONJUGATING ENZYME E2 | Bpl_scaf_52001 | 572398 | 583982 | + |
| CDS | |||||
| Bpl_scaf_52001-5.54 | |||||
| Transcript |
| Bpl_scaf_52001-5.54 |
| Protein |
| Bpl_scaf_52001-5.54 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | E2|UBC|UBC |
| Ubiquitin Family | UBD|UBC-like|UBC |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00179 | UQ_con | Ubiquitin-conjugating enzyme | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000608 | Domain | Ubiquitin-conjugating enzyme E2 | Interproscan |
| IPR016135 | Homologous_superfamily | Ubiquitin-conjugating enzyme/RWD-like | Interproscan |
| IPR023313 | Active_site | Ubiquitin-conjugating enzyme, active site | Interproscan |
| IPR050113 | Family | Ubiquitin-conjugating enzyme | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR24067 | UBIQUITIN-CONJUGATING ENZYME E2 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005634 | Cellular Component | nucleus | Interproscan |
| GO:0016925 | Biological Process | protein sumoylation | Interproscan |
| GO:0061656 | Molecular Function | SUMO conjugating enzyme activity | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K10577 | UBE2I, UBC9; ubiquitin-conjugating enzyme E2 I | - | RNA transport | ko03013 | PMID: 28812709 |
| Ubiquitin mediated proteolysis | ko04120 | PMID: 28812709 | |||
| NF-kappa B signaling pathway | ko04064 | PMID: 28812709 | |||
| MicroRNAs in cancer | ko05206 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_52001-5.54 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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