Detailed information of Bpl_scaf_51690-1.23 in Gigantidas platifrons Gene info
Gene IDAnnotationScaffoldStartEndStrand
Bpl_scaf_51690-1.2330S/40S RIBOSOMAL PROTEIN S4Bpl_scaf_51690148591169449-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00900Ribosomal_S4eRibosomal family S4eFamilyInterproscan
PF08071RS4NTRS4NT (NUC023) domainDomainInterproscan
PF1612140S_S4_C40S ribosomal protein S4 C-terminusFamilyInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000876FamilySmall ribosomal subunit protein eS4Interproscan
IPR013843DomainSmall ribosomal subunit protein eS4, N-terminalInterproscan
IPR013845DomainSmall ribosomal subunit protein eS4, central regionInterproscan
IPR014722Homologous_superfamilyLarge ribosomal subunit protein uL2, domain 2Interproscan
IPR032277DomainSmall ribosomal subunit protein eS4, C-terminal domainInterproscan
IPR036986Homologous_superfamilyRNA-binding S4 domain superfamilyInterproscan
IPR038237Homologous_superfamilySmall ribosomal subunit protein eS4, central domain superfamilyInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR1158130S/40S RIBOSOMAL PROTEIN S4Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0003735Molecular Functionstructural constituent of ribosomeInterproscan
GO:0005840Cellular ComponentribosomeInterproscan
GO:0006412Biological ProcesstranslationInterproscan
GO:0022627Cellular Componentcytosolic small ribosomal subunitInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K02987RP-S4e, RPS4; small subunit ribosomal protein S4e-Ribosome ko03010PMID: 28812709

Expression pattern
 1. Expression trend for Bpl_scaf_51690-1.23 global RNA-seq network
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