| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_51682-2.12 | - | Bpl_scaf_51682 | 150051 | 222801 | + |
| CDS | |||||
| Bpl_scaf_51682-2.12 | |||||
| Transcript |
| Bpl_scaf_51682-2.12 |
| Protein |
| Bpl_scaf_51682-2.12 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF08163 | DNAPKcs_CC3 | DNA-dependent protein kinase catalytic subunit, CC3 | Repeat | Interproscan |
| PF20502 | DNAPKcs_CC1-2 | DNA-dependent protein kinase catalytic subunit, CC1/2 | Repeat | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR012582 | Domain | DNA-dependent protein kinase catalytic subunit, CC3 | Interproscan |
| IPR016024 | Homologous_superfamily | Armadillo-type fold | Interproscan |
| IPR046803 | Domain | DNA-dependent protein kinase catalytic subunit, CC1/2 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| - | - | - |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005634 | Cellular Component | nucleus | Interproscan |
| GO:0006303 | Biological Process | double-strand break repair via nonhomologous end joining | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K06642 | PRKDC; DNA-dependent protein kinase catalytic subunit | EC:2.7.11.1 | Non-homologous end-joining | ko03450 | PMID: 28812709 |
| Cell cycle | ko04110 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_51682-2.12 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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