Gene detail

Detailed information of Bpl_scaf_50918-2.11 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_50918-2.11	DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE SUBUNIT	Bpl_scaf_50918	262244	301895	+

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

Bpl_scaf_50918-2.11

CCGGAAGTTGAATTCATCAGCCGGTGCGAAAGTTGAGATATTTCAAAAGAAAATGAAGACATCACAGATACCATGGGGTTTAAGTTGGTTATACAGAATGTCGCCAGAAAAACAGGACACCATGTTAAAGATGGTTGTTCTTACAATAGCAGCCATACTGTCCTTTTCAACCCGACTGTTTTCTGTACTAAGATTTGAGAGTGTTATTCATGAGTTTGATCCATACTTTAACTACAGAACCACTAGGTTTTTAACTGAAGAAGGATTCTATAAATTTCACAACTGGTTTGATGACAGAGCATGGTATCCTCTTGGAAGAATCATAGGAGGAACAATATACCCAGGATTGATGGTAACGTCTGCAGTCCTCTATCATGCTATGTGGTTTTTCCACATCACCATTGACATCAGGAATGTTTGCGTGTTCCTGGCACCATTATTTTCTAGCCTGACTACACTGGTGACTTACCAGTTTACTAAAGAACTTAAGGATGCTGGTGCTGGGTTGGTTGCTGCAGCAATGATATCTATTGTTCCTGGTTACATCTCTAGATCTGTTGCCGGTTCTTATGACAATGAAGGTATAGCCATCTTTTGTATGCTGTTGACCTATACACTGTGGATAAAGTCAGTGAAGACAGGATCTGTGTTCTGGAGTTCTCTGTGTGCTCTAGCATACTTCTACATGGTTTCATCGTGGGGAGGATATGTTTTTCTAATCAATTTGATACCACTTCATGTGTTGGCTTTGATGGCCACTGGAAGATTTTCTCACAGGATTTATGTAGCATATTCCACAGTATATTGTTTAGGAACCATCCTGTCCATGCAGATATCATTTGTTGGATTTCAACCAGTTCAATCTAGTGAACATATGGCTGCTCTGGGTGTGTTTGGACTCTGTCAGATTCATGCCTTTGTAGACTATGTTAGATCTAGATTAAACACAGAACAGTTTAATATACTGTTTAGATCAATGGTTCTGTTGGTAGGAATTCTAGGAACAGCAGCTGGTGCTGTAGCCACGGCAACAGGAAAAATTTCTCCATGGACTGGACGTTTTTATTCATTGTTGGATCCTTCCTATGCCAAGAATAACATCCCTATTATAGCCTCTGTGTCAGAACATCAGCCCACGTCATGGAGCTCCTTCTACTTTGATCTACAGATGTTGGTCTTCCTCTTCCCAGCTGGATTATACTTCTGCTTTAGTCGACTCACCGATGCCAACATCTTTATTATCATGTATGGAGTGACTAGTATATATTTTGCTGGTGTTATGGTACGTTTGATGTTGGTATTAGCACCAGTGATGTGTATTCTATCAGGAATAGGTGTGTCAGCTACTCTTACTACATACATGAAGAATCTTGATGTTAAAAAAGACAAGAAATCTAAAAGGGCTGATGCTTCTTATCCCATGAAAAATGAGGTTGCTTCAGCCGTTGTATTTATGATGACTGCCTTCTTAATAACTTACACCTTCCACTGTACATGGGTGACATCAGAGGCTTACTCCAGTCCTTCCATTGTCTTGTCAGCCAGGTCAGGGGATGGAGGAAGAATTATCTTCGATGATTTCCGTGAAGCTTATTATTGGTTGAGACAAAACACACCTGAGGATGCTAAGGTTATGTCATGGTGGGATTATGGATATCAAATAACAGCCATGGCTAATAGGACCATTCTAGTTGACAATAATACATGGAATAACACACATATATCTCGAGTTGGACAGGTATACACCTGAAAAATGAAATATCATTTCTTACCTGGAACAGTGGGAATATAATAAGGCTGAAGTATTGTTATTTTTGTTTGTTTCAGATATCAATAAATTTTTATGGATGGTAAGAATAGGTGGTAGTACAGACAGAGGTAGCCACATAAAGGAATCAGATTATTATACACCACAGGGAGAGTTCCGTATTGATAAAGATGGCTCCCCAACTCTACTTAATTGTTTGATGTATAAGATGTGTTACTACAGATTTGGACAAGTTTATACAGAAGGGGGTAAACCTCCGGGATATGACAGAGTCAGAAATGCAGAAATTGGAAATAAAGATTTTGAATTGGATGTTTTAGAGGAGGCTTATACATCTGAACATTGGCTTGTACGAATTTATAAAGTTAAAGATCTTGATAATAGAGGATTATAAAATGATATAAAGTTTTCTGTGTACTTAGTACTACAATGTACAATATATTACTGCTACATAAAATGATAAATAAAGTTTTCTGTGTATTTAGTACTACAATATATTACTGCTACATAAAATGATAAATAAAGTTTTCTGTGTACTTAGTACTACAATATATTACTGC

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02516	STT3	Oligosaccharyl transferase STT3, N-terminal	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003674	Family	Oligosaccharyl transferase, STT3 subunit	Interproscan
IPR048307	Domain	Oligosaccharyl transferase STT3, N-terminal domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13872	DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE SUBUNIT	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004576	Molecular Function	oligosaccharyl transferase activity	Interproscan
GO:0004579	Molecular Function	dolichyl-diphosphooligosaccharide-protein glycotransferase activity	Interproscan
GO:0006486	Biological Process	protein glycosylation	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0018279	Biological Process	protein N-linked glycosylation via asparagine	Interproscan
GO:0043687	Biological Process	post-translational protein modification	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K07151	STT3; dolichyl-diphosphooligosaccharide--protein glycosyltransferase	EC:2.4.99.18	N-Glycan biosynthesis	ko00510	PMID: 28812709
			Various types of N-glycan biosynthesis	ko00513	PMID: 28812709
			Protein processing in endoplasmic reticulum	ko04141	PMID: 28812709

Expression pattern

1. Expression trend for Bpl_scaf_50918-2.11 global RNA-seq network