Gene detail

Detailed information of Bpl_scaf_50441-0.5 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_50441-0.5	PROTEIN SIDEKICK	Bpl_scaf_50441	1266	53072	+

Gene Structure

More details in Jbrowse Sequence

CDS

Bpl_scaf_50441-0.5

GCGACTCTTCCTGGACCACCAACGGATGTTAAATTGACCAACGTAACTCAGACGACTGCCACGTTACAGTGGACTGCACCTATAAACGGAACAGTCGAACAATATACCATAGCTTATCTAGAGCACAACAGAGAGGGATCATCTCCCCCCAACATGGATACAACAAACGAAACAACTTTCCAGCTGACAGGACTGACTCCTAACACAGAATATGATGTAGTTATAGTATCATCTAATGATGCAGGAACAAGTCTACCATCACCTACCATTGGTCTTCTTACATATGCTGTTGTACCATCCGTGTCCCCAGTCACACCCTCACCAGGCCCTGGATTACCGTATGATTTATCAGCTTGTTGTAAAGAGAAAGGCATGCCAGATACTTGTATGCCACTCTGTGATTATGGATTTATCATCAATGCTACTGCCGCTGACCTATTTAAAATAGCCTTTCCCTGCATAAATGATTTTGGCTTGGTTCTGACCTGTGGTTCAGATGGACGAGACCATACAAAGTGTTGTGAAGATAGGAATGTGAATTCTGATTGCTACCAGCTTTGTCAAGGAGATTTCGATGGAGCTAATGTAATTTGTGCTTTAGAGGCACCAAAAATAGCACAGTGTTTTAAAGAAGGAATAATTAACTTACCCAGACCTCCAACTGGTGTGTATATAGATCAGGTAACAGCTCACACTATAACTGTAGTCTGGTCTCCACCATCAACTGGTCCTACAGCTACCTCCTATATAGTTCTGTGTGATGGTTGTAGTAAAGGAGGTGTGAAGGTAACAACCAGTGCTACATCATACATTCTACAGAACCTTAGAGGAGGATATAAATACAACATCTCTGTCATCTCATCAAATACTGATGGATACAGTATACCAAGTCCTTCACTGTCTGTATTCCTGCCTGTTGATGACCATAAATACAACTGTTCTGATGATTTCATGAAATATACAGACAAAACTATTGACAAAAGTACTGTGTGGAAGTCAATTTCAGTCGAAGCTAACACCTTAGAATTATGTAAGACAAAGTGTTTAAATACCACACTGGGAAGTCCATGTACAGGATTTAGCTTCACACAGGCATCAAAGAATGCTCCCTACTGTATGATATTTATTGGAAAATATGGACAAAAACATACCATGAATGGCACAGATTTCTATGCCAGAAAATGCAACTTTGAAATTCCTGAAGTTCCACCAATGAATGGATCTCAACATCTTTCCTGGAAAAATCAGAAAGAATGTTGTAATGTTCATAATGTCACTGCATCGTGTATGCCATTTTGTGAAGCAGGGAATGCTTTCTCTGACCCACAGACATGTGCAGATGACTTCTCCACAACTATTGCTTGTGCTTCAGATGGTAAGAACCACTCATCATGTTGTCAACAAGCTGGAGTACCCGACTCTTGTTTACCTCTCTGCTGGGGAATTGTAATGGACAAAGATCACCCAGTCACAAAGCTGTGTCTAAGTTATACAAGGATGTTCATCACTTGTTTCAGTCTGGGTCAACGAACAATTCCATCAATACCACAGAGTTTCAGAGTGACAGATATTGGAACAACATTTATTGGAGTAGCCTGGGAGAAACCAGAACAAAATTGTGACCCCATTGAATGCTCCTATAACATTCAGTATTATACATATGTCAACAGTGAAACAAAATATTATTGGAATAACACCCAGAAGAACTTAACAAATTTACAACCAGAAACACAATATCACATTACTGTGTCAGCAGTCAATAAATATGGCAGTAGTTTATCTACCCCTATCATCATGGCCAGAACTGATTCCGTTGTGACATTTGAAATGAACTTTTACATCAGACCTGATGCTGTGATAGATAAAGGTAAAACTGTAGCACTAATCTGTGAAGTCTTCGGGGCTCCAGATGCTGTTGTTTCCATCAAATTTAAGAGAAAAGAAATCTCTACTGAAAGAGTCTACACTATATTGTCTGCTACAGAGACTGACGATGGGGAGTATACTTGTACTGTTAAAAAGAGTCCAAGTGATGCCACCCCCATAGCAAAGAAATTGACACTGATGGTTAGATATAAGCCAAATGTACTTAATGTAATAGGTGACCATGTCCAACCAAATGCTGGTAGAACAGCGTACTTAAAATGTATATTTGAGGGACTACCAATAAATGTAGTATGGACGAAAGATGGGAATCATCGAATAAATTATTACACATCGGTAACAACAATATTTCACGCTGATGGGAAGTTAACTGACACATTACAGATTTACAATGTTCGTAGCCACATGTATGGACGCTATCAGTGTAATGGAACCAATGACTTTGGAAATGCTGTAGGACACATGGAATTAAAAACTGATTACTATCCACCGACGGTTATTCCACCGAAACCAGCCAACGAAAGTTTTACAGAGTGTTGTACAACAAATGGTATTAGTGGTGTATGTCTAGAACTTTGTAGCTTTGATGTCGACTTTGCCGCTATAGTAAATGATAAATATGACGAATGTTTAACGTTTCTACCTCTCTATGTAACGTGTGCTACAGGTAGGTACAGTCAAACTCTCAGTGTGTTGATATCACAAGCACTAGCAATTTACTTGAACTTATATGGTGCTTTGAGACAGCCATAG

Transcript

Bpl_scaf_50441-0.5

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00041	fn3	Fibronectin type III domain	Domain	Interproscan
PF01682	DB	DB module	Family	Interproscan
PF07679	I-set	Immunoglobulin I-set domain	Domain	Interproscan
PF13895	Ig_2	Immunoglobulin domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002602	Domain	Domain of unknown function DB	Interproscan
IPR003598	Domain	Immunoglobulin subtype 2	Interproscan
IPR003599	Domain	Immunoglobulin subtype	Interproscan
IPR003609	Domain	PAN/Apple domain	Interproscan
IPR003961	Domain	Fibronectin type III	Interproscan
IPR007110	Domain	Immunoglobulin-like domain	Interproscan
IPR013098	Domain	Immunoglobulin I-set	Interproscan
IPR013783	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR036116	Homologous_superfamily	Fibronectin type III superfamily	Interproscan
IPR036179	Homologous_superfamily	Immunoglobulin-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR44170	PROTEIN SIDEKICK	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0098609	Biological Process	cell-cell adhesion	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for Bpl_scaf_50441-0.5 global RNA-seq network