Gene detail

Detailed information of Bpl_scaf_50304-1.9 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_50304-1.9	ALPHA-L-FUCOSIDASE	Bpl_scaf_50304	91273	106988	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

Bpl_scaf_50304-1.9

GACCGGGCAATGTACCATACTCTCTTGATCAGTCATGTGATATATAACAAACACATCGACATTTTGATCACAGCCTGGGCATTGATCATTGAGTATCGTTAACGTTGTTCACGTACGTTTATTGTGATATTGCAGATTGTGAAATCCAGACATGAATGTGCAATTCTATTTCATTCTAATCTGTTCTATATTCTCTTATTGTGTGATTTCTGTGAAATACGAGCCAAACTGGGACTCGTTAGATTCTAGACCACTGCCGTCATGGTATGATGAAGCCAAATTTGGTATATTTATTACATGGGGTGTATATTCTGTGCCAAGTGTTGACGATGAATGGTTTTGGAAATATTGGATGGATCGTAGTGACCCAAAAATCGTAGATTATATGGAAAAGAACTTCAGACCAGACTTTACTTATCAAGATTTTGCTTCGATGTTTACAACAGAGTTTTATAATCCAGAAGAATGGGCAGACATATTTAAGGCATCTGGTGCGAAGTACACAATTTTCGTAACAAAACACTGTGATGGATACACAATGTGGCCATCCAAAACTGCATTCAACTGGAATTCAAATGCCACCGGACCTAACAGAGACCTTGTTGGTGAATTTGCATCTGCATTACGAAAGAAGACGGATATCAGAGTAGGACTATACCATTGTCTGCATGAATGGTACAATCCACTTTACCTCCGGGATAAAGCCTTAAATTTCACAACCAGAAATTATGTGGATTACAAAATAACGCCTGCACTCCATGAACTTGTTGAGAATTACAAACCAGAGCTAATTTGGTCTGATATATGTGAGACTGAAGGACCAGCTTCTTATTTTCAGTCACGGGAATTTTTGGCATGGCTTTACAATGAAAGGTGTATTGCAGAAACGAAAATTTGAAGGTGGTTTGACCATAGACCGAAATACATGGGGATACCGTAGAAATAGTAATTTAGCAGACTTCCTAAGTGTTCATGAAATAATTTCACATTTTGCCTCAGTCATAAGTTGTGGTGGTAATATGGTATTAAATGTAGGTCCTACAAAGGAAGGGAAAATTGTTCCCATATTTGAAGAAAGACTTCGACAGTTTGGTAGTTGGTTAGGAGTGAATGGAGAGGCTGTTTATAGCTCAAGGCCATGGAGTAATCAGAACGACACAGTGATTAAAAACATATGGTACACTATGAAGAAGACTGAAAATGGTGGCACAACAGTGTATGCCTTTCTTCTCTCCTGGCCGGAGGACACAGTTCTGAAGTTAGGGGCTCCTATACCGTCACCTAACACAGAAGTGACAATGCTTGGATATGCAGACAAATTTGATTACATAGCAGGACCTGGTGGACAAGGAGTATATGTGACAATACCCAATATATCTTGGAATAAGTTACCCTGCCAGTGGGTTTGGGTACTCAAAATGACCTCCATAGAGAACTGATTAACATAATATAACTACTCAATAAGTTTTGTTTGAATGATGGAATGTGTTTGTGTTTTACTGATATTTTAAGTGATTGAGAATTGTATAAACTGAAACATTATTGTATGAAAGGGAGATTTAGTAACCTGTGAGAATGTGGAATGATAATCAACATCAGGGTCGTCTTGACAGCATTATAGGCCCCTGTTCAAAGCAGTGTACTGGGATCCCTACCAACACAACCACTCGCAGCAATAAAAATGTAAATGTCCTTCAAATTAAACATTTATTTATTGTATTGGTACTTCCAGGAAATCAGTATTTAAACATTAAAAAACTACCCAGCATTCTCATGTGTTAAGACGGCACTGATCAATGTCAGTACCATTAAGAGAGATATATTTTTCCTGCCTTATCATAAATATTCAACAATTAATCGTTGAATCTCATTTACTTATGTTAGTCAGGGCACCATTTCACAATGTGGCTACATAACTTCATACAACAAATTACAATCCATTCATAAAGATATAGTACATGTATAAGTTCTTTGTGAAATGATGCCCTGATTAATGTAGATAAGATGTCACCAGTGTTTTATTTTTCTTTGCAATGGAACTCTCTTGGTGAATCTGACATATGGGACATAATGGATATAATTTGTCATCCAGTTTTTATAGCAACATTCCATTTTAATTTTTATTTATGGTATTTATTATATTACATGTACTTTTATATTAAATAATACCCCAAA

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01120	Alpha_L_fucos	Alpha-L-fucosidase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000933	Family	Glycoside hydrolase, family 29	Interproscan
IPR016286	Family	Alpha-L-fucosidase, metazoa-type	Interproscan
IPR017853	Homologous_superfamily	Glycoside hydrolase superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10030	ALPHA-L-FUCOSIDASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004560	Molecular Function	alpha-L-fucosidase activity	Interproscan
GO:0005764	Cellular Component	lysosome	Interproscan
GO:0005975	Biological Process	carbohydrate metabolic process	Interproscan
GO:0006004	Biological Process	fucose metabolic process	Interproscan
GO:0016139	Biological Process	glycoside catabolic process	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for Bpl_scaf_50304-1.9 global RNA-seq network