| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_50283-1.19 | APRATAXIN-RELATED | Bpl_scaf_50283 | 100637 | 115764 | - |
| CDS | |||||
| Bpl_scaf_50283-1.19 | |||||
| Transcript |
| Bpl_scaf_50283-1.19 |
| Protein |
| Bpl_scaf_50283-1.19 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF11969 | DcpS_C | Scavenger mRNA decapping enzyme C-term binding | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR011146 | Domain | HIT-like domain | Interproscan |
| IPR019808 | Conserved_site | Histidine triad, conserved site | Interproscan |
| IPR036265 | Homologous_superfamily | HIT-like superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR12486 | APRATAXIN-RELATED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000012 | Biological Process | single strand break repair | Interproscan |
| GO:0003697 | Molecular Function | single-stranded DNA binding | Interproscan |
| GO:0003725 | Molecular Function | double-stranded RNA binding | Interproscan |
| GO:0003824 | Molecular Function | catalytic activity | Interproscan |
| GO:0005634 | Cellular Component | nucleus | Interproscan |
| GO:0030983 | Molecular Function | mismatched DNA binding | Interproscan |
| GO:0033699 | Molecular Function | DNA 5'-adenosine monophosphate hydrolase activity | Interproscan |
| GO:1990165 | Molecular Function | single-strand break-containing DNA binding | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K10863 | APTX; aprataxin | EC:3.6.1.70 EC:3.6.1.71 EC:3.6.1.72 | Base excision repair | ko03410 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_50283-1.19 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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