Detailed information of Bpl_scaf_5008-0.2 in Gigantidas platifrons Gene info
Gene IDAnnotationScaffoldStartEndStrand
Bpl_scaf_5008-0.2DEADENYLATION COMPLEX SUBUNIT PAN3Bpl_scaf_5008625334723-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Transcription Factors Familyzf-CCCH

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00642zf-CCCHZinc finger C-x8-C-x5-C-x3-H type (and similar)FamilyInterproscan
PF18101Pan3_PKPan3 Pseudokinase domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000571DomainZinc finger, CCCH-typeInterproscan
IPR000719DomainProtein kinase domainInterproscan
IPR011009Homologous_superfamilyProtein kinase-like domain superfamilyInterproscan
IPR030844FamilyPAN2-PAN3 deadenylation complex subunit PAN3Interproscan
IPR036855Homologous_superfamilyZinc finger, CCCH-type superfamilyInterproscan
IPR041332DomainPan3 pseudokinase domainInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR12272DEADENYLATION COMPLEX SUBUNIT PAN3Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000289Biological Processnuclear-transcribed mRNA poly(A) tail shorteningInterproscan
GO:0000932Cellular ComponentP-bodyInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0004672Molecular Functionprotein kinase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006397Biological ProcessmRNA processingInterproscan
GO:0006468Biological Processprotein phosphorylationInterproscan
GO:0008143Molecular Functionpoly(A) bindingInterproscan
GO:0031251Cellular ComponentPAN complexInterproscan
GO:0046872Molecular Functionmetal ion bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K12572PAN3; PAB-dependent poly(A)-specific ribonuclease subunit 3-RNA degradation ko03018PMID: 28812709

Expression pattern
 1. Expression trend for Bpl_scaf_5008-0.2 global RNA-seq network
TOP