Detailed information of Bpl_scaf_50079-1.6 in Gigantidas platifrons Gene info
Gene IDAnnotationScaffoldStartEndStrand
Bpl_scaf_50079-1.6EBNA2 BINDING PROTEIN P100Bpl_scaf_50079165949202450-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00565SNaseStaphylococcal nuclease homologueDomainInterproscan
PF00567TUDORTudor domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR002999DomainTudor domainInterproscan
IPR016071DomainStaphylococcal nuclease (SNase-like), OB-foldInterproscan
IPR016685FamilyRNA-induced silencing complex, nuclease component Tudor-SNInterproscan
IPR035437Homologous_superfamilySNase-like, OB-fold superfamilyInterproscan
IPR047386DomainTudor domain-containing protein 11, Tudor domainInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR12302EBNA2 BINDING PROTEIN P100Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0004518Molecular Functionnuclease activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0006402Biological ProcessmRNA catabolic processInterproscan
GO:0031047Biological Processregulatory ncRNA-mediated gene silencingInterproscan
GO:0031332Cellular ComponentRNAi effector complexInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K15979SND1; staphylococcal nuclease domain-containing protein 1-Viral carcinogenesis ko05203PMID: 28812709
Epstein-Barr virus infection ko05169PMID: 28812709

Expression pattern
 1. Expression trend for Bpl_scaf_50079-1.6 global RNA-seq network
TOP