| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_49896-8.5 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE | Bpl_scaf_49896 | 772795 | 864959 | + |
| CDS | |||||
| Bpl_scaf_49896-8.5 | |||||
| Transcript |
| Bpl_scaf_49896-8.5 |
| Protein |
| Bpl_scaf_49896-8.5 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | UBD|Alpha-Helix|UBA |
| Ubiquitin Family | DUB|USP|USP |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00443 | UCH | Ubiquitin carboxyl-terminal hydrolase | Family | Interproscan |
| PF00627 | UBA | UBA/TS-N domain | Domain | Interproscan |
| PF12030 | DUF3517 | Domain of unknown function (DUF3517) | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001394 | Domain | Peptidase C19, ubiquitin carboxyl-terminal hydrolase | Interproscan |
| IPR009060 | Homologous_superfamily | UBA-like superfamily | Interproscan |
| IPR015940 | Domain | Ubiquitin-associated domain | Interproscan |
| IPR016024 | Homologous_superfamily | Armadillo-type fold | Interproscan |
| IPR018200 | Conserved_site | Ubiquitin specific protease, conserved site | Interproscan |
| IPR021905 | Domain | Ubiquitin C-terminal hydrolase-like, DUF3517 | Interproscan |
| IPR028889 | Domain | Ubiquitin specific protease domain | Interproscan |
| IPR029071 | Homologous_superfamily | Ubiquitin-like domain superfamily | Interproscan |
| IPR038765 | Homologous_superfamily | Papain-like cysteine peptidase superfamily | Interproscan |
| IPR047061 | Domain | Ubiquitin-specific peptidase 24, ubiquitin-like domain | Interproscan |
| IPR050164 | Family | Ubiquitin carboxyl-terminal hydrolases | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR24006 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0004843 | Molecular Function | cysteine-type deubiquitinase activity | Interproscan |
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0005634 | Cellular Component | nucleus | Interproscan |
| GO:0005829 | Cellular Component | cytosol | Interproscan |
| GO:0016579 | Biological Process | protein deubiquitination | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K11840 | USP9_24; ubiquitin carboxyl-terminal hydrolase 9/24 | EC:3.4.19.12 | Peptidases and inhibitors | ko01002 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_49896-8.5 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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