Detailed information of Bpl_scaf_49896-4.4 in Gigantidas platifrons Gene info
Gene IDAnnotationScaffoldStartEndStrand
Bpl_scaf_49896-4.4MIP04163PBpl_scaf_49896365153394378+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Transcription Factors FamilybHLH

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00010HLHHelix-loop-helix DNA-binding domainDomainInterproscan
PF15951MITF_TFEB_C_3_NMITF/TFEB/TFEC/TFE3 N-terminusFamilyInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR011598DomainMyc-type, basic helix-loop-helix (bHLH) domainInterproscan
IPR031867DomainMiT/TFE transcription factors, N-terminalInterproscan
IPR036638Homologous_superfamilyHelix-loop-helix DNA-binding domain superfamilyInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR45776MIP04163PInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0046983Molecular Functionprotein dimerization activityInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K09455MITF; microphthalmia-associated transcription factor-Mitophagy - animal ko04137PMID: 28812709
Melanogenesis ko04916PMID: 28812709
Osteoclast differentiation ko04380PMID: 28812709
Pathways in cancer ko05200PMID: 28812709
Melanoma ko05218PMID: 28812709

Expression pattern
 1. Expression trend for Bpl_scaf_49896-4.4 global RNA-seq network
TOP