Detailed information of Bpl_scaf_49546-3.40 in Gigantidas platifrons Gene info
Gene IDAnnotationScaffoldStartEndStrand
Bpl_scaf_49546-3.40U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN IMP4Bpl_scaf_49546259706274418-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04427BrixBrix domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR007109DomainBrix domainInterproscan
IPR044281FamilyU3 snoRNP protein/Ribosome production factor 1Interproscan

PANTHER
PANTHER termDescriptionSource
PTHR22734U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN IMP4Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000460Biological Processmaturation of 5.8S rRNAInterproscan
GO:0000470Biological Processmaturation of LSU-rRNAInterproscan
GO:0005730Cellular ComponentnucleolusInterproscan
GO:0006364Biological ProcessrRNA processingInterproscan
GO:0019843Molecular FunctionrRNA bindingInterproscan
GO:0030687Cellular Componentpreribosome, large subunit precursorInterproscan
GO:0042134Molecular FunctionrRNA primary transcript bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K14846RPF1; ribosome production factor 1-Ribosome biogenesisko03009PMID: 28812709

Expression pattern
 1. Expression trend for Bpl_scaf_49546-3.40 global RNA-seq network
TOP