| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_49537-5.5 | FAT ATYPICAL CADHERIN-RELATED | Bpl_scaf_49537 | 406166 | 422129 | + |
| CDS | |||||
| Bpl_scaf_49537-5.5 | |||||
| Transcript |
| Bpl_scaf_49537-5.5 |
| Protein |
| Bpl_scaf_49537-5.5 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00028 | Cadherin | Cadherin domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR002126 | Domain | Cadherin-like | Interproscan |
| IPR015919 | Homologous_superfamily | Cadherin-like superfamily | Interproscan |
| IPR020894 | Conserved_site | Cadherin conserved site | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR24026 | FAT ATYPICAL CADHERIN-RELATED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005509 | Molecular Function | calcium ion binding | Interproscan |
| GO:0005886 | Cellular Component | plasma membrane | Interproscan |
| GO:0007155 | Biological Process | cell adhesion | Interproscan |
| GO:0007156 | Biological Process | homophilic cell adhesion via plasma membrane adhesion molecules | Interproscan |
| GO:0016020 | Cellular Component | membrane | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K04600 | CELSR1; cadherin EGF LAG seven-pass G-type receptor 1 | - | Peptidases and inhibitors | ko01002 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_49537-5.5 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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