Detailed information of Bpl_scaf_49462-8.11 in Gigantidas platifrons Gene info
Gene IDAnnotationScaffoldStartEndStrand
Bpl_scaf_49462-8.11U1 SMALL NUCLEAR RIBONUCLEOPROTEIN 70 KDBpl_scaf_49462845001846224-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00076RRM_1RNA recognition motifDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000504DomainRNA recognition motif domainInterproscan
IPR012677Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR035979Homologous_superfamilyRNA-binding domain superfamilyInterproscan
IPR051183FamilyU1 snRNP 70 kDa and U11/U12 snRNP 35 kDaInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR13952U1 SMALL NUCLEAR RIBONUCLEOPROTEIN 70 KDInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000398Biological ProcessmRNA splicing, via spliceosomeInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0003729Molecular FunctionmRNA bindingInterproscan
GO:0005689Cellular ComponentU12-type spliceosomal complexInterproscan
GO:0017069Molecular FunctionsnRNA bindingInterproscan
GO:0071011Cellular Componentprecatalytic spliceosomeInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K13155SNRNP35; U11/U12 small nuclear ribonucleoprotein 35 kDa protein-Spliceosomeko03041PMID: 28812709

Expression pattern
 1. Expression trend for Bpl_scaf_49462-8.11 global RNA-seq network
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