Detailed information of Bpl_scaf_49352-6.19 in Gigantidas platifrons Gene info
Gene IDAnnotationScaffoldStartEndStrand
Bpl_scaf_49352-6.19WD-40 REPEAT PROTEINBpl_scaf_49352664013688962-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00400WD40WD domain, G-beta repeatRepeatInterproscan
PF03451HELPHELP motifRepeatInterproscan
PF20742DUF5580_MFamily of unknown function (DUF5580) middle domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001680RepeatWD40 repeatInterproscan
IPR002048DomainEF-hand domainInterproscan
IPR005108Conserved_siteHELP motifInterproscan
IPR011047Homologous_superfamilyQuinoprotein alcohol dehydrogenase-like superfamilyInterproscan
IPR011992Homologous_superfamilyEF-hand domain pairInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR018247Binding_siteEF-Hand 1, calcium-binding siteInterproscan
IPR049246DomainDUF5580, middle domainInterproscan
IPR050630FamilyWD repeat Echinoderm Microtubule-associated Protein-likeInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR13720WD-40 REPEAT PROTEINInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000226Biological Processmicrotubule cytoskeleton organizationInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0008017Molecular Functionmicrotubule bindingInterproscan
GO:0072686Cellular Componentmitotic spindleInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K18595EML1_2; echinoderm microtubule-associated protein-like 1/2-Cytoskeleton proteinsko04812PMID: 28812709

Expression pattern
 1. Expression trend for Bpl_scaf_49352-6.19 global RNA-seq network
TOP