| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_49180-5.10 | NUCLEAR FACTOR-RELATED | Bpl_scaf_49180 | 545563 | 565931 | - |
| CDS | |||||
| Bpl_scaf_49180-5.10 | |||||
| Transcript |
| Bpl_scaf_49180-5.10 |
| Protein |
| Bpl_scaf_49180-5.10 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | E3|E3 activity RING|PHD |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00628 | PHD | PHD-finger | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001965 | Domain | Zinc finger, PHD-type | Interproscan |
| IPR011011 | Homologous_superfamily | Zinc finger, FYVE/PHD-type | Interproscan |
| IPR013083 | Homologous_superfamily | Zinc finger, RING/FYVE/PHD-type | Interproscan |
| IPR019786 | Conserved_site | Zinc finger, PHD-type, conserved site | Interproscan |
| IPR019787 | Domain | Zinc finger, PHD-finger | Interproscan |
| IPR039054 | Domain | Int12, PHD finger | Interproscan |
| IPR051776 | Family | Integrator complex subunit 12 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR13415 | NUCLEAR FACTOR-RELATED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0032039 | Cellular Component | integrator complex | Interproscan |
| GO:0034472 | Biological Process | snRNA 3'-end processing | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K13149 | INTS12; integrator complex subunit 12 | - | Spliceosome | ko03041 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_49180-5.10 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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