Gene detail

Detailed information of Bpl_scaf_49180-1.5 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_49180-1.5	HEAT SHOCK PROTEIN 90 FAMILY MEMBER	Bpl_scaf_49180	95766	169540	-

Gene Structure

More details in Jbrowse Sequence

CDS

Bpl_scaf_49180-1.5

GGTGGACAAAGTATAGGGAAAATCATACAAAGATTTCCTGAGAAAGATTGGGATGATTGTCCATGCACAGTTGGCATAGAATTGTTCTGTCAACCAGCAGGATGGAAGTTGTCACCACAAAGATGTCCGCCAGAGTTTTTTATAGCTGTGCTGACAGACATGGATGCAGACCGCCATTATTGTGCATGTCTGTCATTCAGCGAGTCTGTCTCAGTAACAATGCCACGTCCAGATGACGACGGTGATACAGACGAGACAGAGAACGCTATAGCTCACCAATCGCTCATGTTCTCACCAAAATGTCTCGTGCTTGTGTCAAGACTTGATTACTTTGAAACATTTAGGAACTGTTTAGGAATAATATATACTGCTTATGTAGATAGACTTGATGCACAATTGGAAGTTTTAGTAGGAAATATAATTGGATGTGTTTATGTCCCACCCCCAGGTGGACCACAAGTTAGATTTTCAATAGGAGCTGGTGACAGACAAGCCTTACAGCCCAAACTTAACAGTTCCATACCCTCTTCTAGAAACTGTGTGGCCTTATTATTTCAACAACTCGGTATCCACAACACACTGGTGCTATTTTGTGCTGCTTTAACAGACCATAAGATCGTATTTCATTCTCGTAGTTATTCTAGATTGACAGATGCCTGCCAAGCTATTGTTGTATTGCATTATCCACTTAAATTTAGTTATGTATATATCCCAATTTTACCTGCTCATCTTGTAGAAGTATTAAATTCACCCACACCATATATGGCAGGAGTCCATTCATCCTTAACTGAGGACACTGCTGATTTGTTGGATGTTATCATCGTAGATTTGGATGGTGGCAGCATAAAGATACCAGAATGTGTGAATATTCCCATGATTCCTGAACCAATACTCAGTCGGACCAAAAATTCACTTCATATGATTTTGAATATTGAATTGTTAAATGCTGATATGGCTTTTCCACAACCTCCACAGAAGAAACAGACAAATATTGAAATGAAGGACAAGGAAATACGTGCAGTATTCATTCGTTTATTTGCTGAGCTATTAACAGGCTACAGAACCTGTCTGACAGTCATTCGTATTCATCCGGAGCCTTTCATCACATTTCATAAGGCAAATTTTCTTAGCAACAGAGGATATATAGAAGATGACTTTCTAGTCAGGGTATTAGATTGTATGGCTTTTGGTGGATTTGTAGCAGAGAGAGGTCCACCATATCGTGTCTGTGATATTTTTGATGAGATCTATGCAAATATACAAGATCTGTTAGGTGAAGAAAGATCTGATCCTAATAAAATGATGGAGAATATAAAGGATTTGGCCAAACAATTGTATACTAATGAAAATCCTAACCCTCAGCCTTACGTCCAGAAGGTGCCAAAGCCTACAGAAGGAGCATACAGTCGGATACATCAGCCTCAGTTTCCATATTTAGACTGGTTACATGTACAGGAGGTTATAGAAGAAGGAATTGCCAAGAACAATCTGAAATCCAAATTCACCAACATGAGACCTCAGCAACTTAGAATAGTACCTATAGGGCCGCCAGCTACTACACTGACAGAGAGACAAAGAATGGTTGACAATAATGCTAGACGATTAGAAGTTCTCAGAAACTGTGTTAACTTTATCTTTGAAAACAAGATTTCAGATGGTAGAATTATATTTCCAGCTGTGTTGAGAGCATTGAAAAGTAGAGTAGCGAGGACTGCTTTAACACAGGAGCTAAGTTATCACATACGTAGTAACAGGGCTATGTTAGAACATCAGCAGTTTGATCTGGTCGTCAAACTTCTAAACTGTGCTTTACAGAATGATTCCAGTATGGATGAGAATGGCATTGCTGCAGCTATTTTACCACTGGCTACCACTTTCTGTCGGAAATTATGTACAGGAGTGATTCAGTTTGCCTACACATGTGTACAGGAACATGCTGTTTGGGGAAATCTTCAGTTTTGGGAAGCTGCTTTTTATCAGGATGTACAAAAACAGATCAAACAATTGTATGCTCCACACTATGAAGAACATAACATAAGTAAAGATGGAGCATATAGTCCTACATCAAATGAATTGTCAGTCAATTGGAACAGGCAATCATCTACAACACCTGATACAAAGAGAAGATCTGGAATACGTCCTCGAGAAATAGGGGCACTAGAAATAGCTGCTGAGCAGTTACGTGTTTGGCCAAACTTGAATTCTAATCAGAAAGAAGAGATGATAAACAATGAGGAATCTACTGTATTCAGTCAGGCCATCCATTATGCCAACCGTATGGTGTACATGAGGGTACCACTAGACACGAAGACAAGTCTGAAAACTTACTCTGACTGGGAGAGTAACAGTAACAGTAATATTACAGCAAGTCTGGCAGAAAGTGACAGTAATGATGCTGAGAGTGGATTTGATGAGACAGAGGTATCAGATGTAGGCACAGGTGTTATCAAATTTGTCATGAGATTTGTTGATAAAGTTTGTAATGACAGTAAAGTTACTCAAGATCACATCAAGGCTCTTCATACCATGATACCAGGTGTAGTAGCTATGCATGTAGAGACATTGGAGGCAGTGCACAGAGAGAGCAAGAGACTACCCCCAATACAGAAGCCTAAGATATTGAAGCCTACTTTACTACAAGGAGAAGAGATAATAATGGATGGACTGAGGGTGTATCTACTACCTGATGGTAGAGAGGAAGGAACAGGAGGAAACATGGGTGGTCCCTCATTATTACCTGCTGAAGGTGCAGCATTCCTTACTAACTACAGAATTATCTTTAAAGGAATACCCTGTGATCCACTTGCATGTGAACAAGTGGTTGTGAGATATTTTCCAGTGTCAACCATGACAAAAGAAAAACAGATCAAGTTAGGCTATACTCCACATATAGATCAACTTCCTAAGGAGGGAATTCAGATTAGATCAAATATATTCCAGTTGATGAAATTGGCATTTGATGAAGAGGTGATACCAGAAGATATCGATACTTTTAGAAAGCTGTCCAACAAGTCCAGGAATCCTGCAACAGTCTTCCAGACATTTGCTTTTACTGGTCATGTGATGATACAACCAACACCAATGCATAAACATAAGGAGAAGAATGCTTCATTAAAGAACTTCGCAAAGAAAACATTGATGAAAACTGCCAGGAAAGCTGGAATAAAGCCAAAACAGTCGTCACGGAAACATAAATATGTTCTACCAACAGAAACTATGCAACGGCGGAGTATGTCACCAAGATCATCAGGTGGATCAGACAGTGATTCAGAACGACCGAATAGTGAAATGTTTGATGATTTATCTATTGTAGATGAGCTAGAATATGCTTCTTCCTTGACGACAGATCCAAAGACAATAGAAAAGTTACTACAGAGACCTGGTTACCATGACTACGAGAGACTTGGTCTGAATAGTCTGTCAACATCACATCACAGTTCTGAACCAAAGTCAGAACAGTTCAGAGTATCTACAGTCAATGCTAACTTCTCAGTTTGTAGAAGTTACCCAGCATTACTTGTAGTACCTCTAAGTGTAACAGATGACAGCATTACAAAATTAGCTCGTACACACAGACAGTACAGATTTCCTGTTATAACATGGCGACATTCAAGGACCAAAGCTTTACTGATAAGAGCTAGTGGTTTCCATACTAGAGGACTGATGGGGATGCTGAAACATGATACAACATCAGTTTTCACAGACACTGTAACGCTTGCTCATTTATTGTTATTATTGGAGTCTTTATTGTCTGTAATGTCATTCTTTGTCTTCCCTTTTTTGTCGTTTACACTGAATAAATCGATGCCTGAACCTGAAACAACCATGGATGAAGGAGAGACTGAAACATTTGCCTTCCAAGCAGAAATTGCTCAGTTGATGAGTCTGATTATCAACACATTCTACTCCAACAAAGAAATCTTTTTGAGAGAATTGATATCTAACGCCTCTGATGCATTAGATAAGATCAGATACGAGAGTCTAACTGATCCTTCCAAGTTGGACTCCGGTAAAGATTTAGAGATTAGAATTATCCCTGACAAAAACAACAACACACTGACCATTATTGACACAGGAATTGGTATGACCAAAGCTGACCTTGTCAACAACTTGGGTACCATTGCCAAGTCAGGTACTAAAGCCTTCATGGAAGCTTTACAAGCTGGAGCTGACATATCTATGATAGGTCAGTTTGGCGTAGGTTTCTATTCTGCTTACCTGATAGCTGACAAGGTTATAGTACAGACCAAACACAATGATGATGAGGAATACATCTGGGAATCTGCAGCTGGTGGATCATTCACAGTTAGAACTGCAACAGGCGACGAACCCATTGGTAGAGGTACAAAAATCACATTATATATAAAAGAAGACCAGGCAGAATACATTGAAGAGAAAAGAATCAAAGAAGTCGTTAAAAAACACAGTCAGTTTATTGGATATCCAATTAAATTGTTGGTAGAGAAGGAGCGTGATAAGGAGGTTTCTGATGATGAAGAAGATGAAAAGAAAGAAGATGAAGACGAAGAAAAGAAGGATGATAAACCAAAAGTAGAAGACTTGGAGGAGGATGATGATGAAGACAAAAACAAAGACAAGAAAAAGAAAAAAAAAATTAAAGAAAAGTACACGGAGGATGAAGAATTGAACAAAACAAAGCCAATCTGGACCAGAAATCCTGATGATATTACAAAGGAAGATTATGGAGAATTCTACAAATCTCTCACCAATGATTGGGAAGATCATTTAGCAGTCAAGCATTTTTCAGTAGAAGGACAACTCGAATTCAGAGCCTTGCTGTTTGTTCCTAAAAGGGCTCCATTTGATATGTTTGAAAACAAAAAGAAAAAAAACAACATAAAGTTGTATGTGAGGAGAGTTTTTATTATGGACAATTGTGAAGACTTGATCCCAGAGTATCTGAACTTTGTCAAAGGAGTTGTTGATTCAGAAGACTTGCCACTGAATATTTCAAGAGAAATGTTACAACAAAGTAAAATTCTCAAAGTCATCAGAAAGAATTTGGTGAAAAAATGTCTTGAATTGTTTGATGACATCGCTGAAAATAAAGACGATTACAAGAAATTTTATGAGCACTTTTCCAAGAATTTAAAGCTTGGTATTCATGAAGATTCAACAAACAGGAAGAAAATAGCAGAATACATGAGATTTTACACTTCCAGTTCTGGGGAGGAAATGGCTTCACTGAAAGAATATGTCTCCAGAATGAAAGAAAACCAGAAAGTGATTTACTATATAACAGGGGAAAGCAGAGAGGTGGTACAAAGCTCTGCATTTGTTGAGAGGCTTAGGAAAAGTGGATTGGAAGTGATTTACATGGTCGATCCTATTGACGAATATGCTGTACAACAGTTAAAGGAATATGATGGAAAGAATTTGGTCAGTGTAACCAAAGAAGGTCTTGAACTTCCAGAGGATGAAGCAGAGAAGAAAAAGTTTGAGGAAGATAAAGCTGCATTTGAAGGATTGTGCAAAATAATGAAAGACATACTCGACAAGAAAGTGGAAAAGGTTACTGTATCCAACAGATTAGTTATTTCCCCTTGCTGTATAGTTACAAGTCAGTATGGTTGGTCAGCTAACATGGAAAGAATCATGAAGGCTCAGGCTTTAAGAGATACTAGTACCATGGGATATATGGCAGCCAAAAAACATTTGGAAATTAACCCAGATCATGCAATCATTAAATCCTTGAAAGAGAAGTCAGATGCTGATAAAAATGACAAAGCTGTGAAAGACTTAGTGTTATTGTTATATGAAACATCATTGTTAGCATCAGGCTTTTCATTGGAAGAACCGGGACTTCATGCAAACAGAATTCACAGAATGATCAAACTTGGTTTAGGAATTGATGAGGAAGACGCACCAGTAGAAACAACAACAACAGAAGAGATGCCACCACTGGAAGGAGATGAAGATGACGCATCACGCATGGAAGAAGTTGATTGA

Transcript

Bpl_scaf_49180-1.5

Protein

Bpl_scaf_49180-1.5

GGQSIGKIIQRFPEKDWDDCPCTVGIELFCQPAGWKLSPQRCPPEFFIAVLTDMDADRHYCACLSFSESVSVTMPRPDDDGDTDETENAIAHQSLMFSPKCLVLVSRLDYFETFRNCLGIIYTAYVDRLDAQLEVLVGNIIGCVYVPPPGGPQVRFSIGAGDRQALQPKLNSSIPSSRNCVALLFQQLGIHNTLVLFCAALTDHKIVFHSRSYSRLTDACQAIVVLHYPLKFSYVYIPILPAHLVEVLNSPTPYMAGVHSSLTEDTADLLDVIIVDLDGGSIKIPECVNIPMIPEPILSRTKNSLHMILNIELLNADMAFPQPPQKKQTNIEMKDKEIRAVFIRLFAELLTGYRTCLTVIRIHPEPFITFHKANFLSNRGYIEDDFLVRVLDCMAFGGFVAERGPPYRVCDIFDEIYANIQDLLGEERSDPNKMMENIKDLAKQLYTNENPNPQPYVQKVPKPTEGAYSRIHQPQFPYLDWLHVQEVIEEGIAKNNLKSKFTNMRPQQLRIVPIGPPATTLTERQRMVDNNARRLEVLRNCVNFIFENKISDGRIIFPAVLRALKSRVARTALTQELSYHIRSNRAMLEHQQFDLVVKLLNCALQNDSSMDENGIAAAILPLATTFCRKLCTGVIQFAYTCVQEHAVWGNLQFWEAAFYQDVQKQIKQLYAPHYEEHNISKDGAYSPTSNELSVNWNRQSSTTPDTKRRSGIRPREIGALEIAAEQLRVWPNLNSNQKEEMINNEESTVFSQAIHYANRMVYMRVPLDTKTSLKTYSDWESNSNSNITASLAESDSNDAESGFDETEVSDVGTGVIKFVMRFVDKVCNDSKVTQDHIKALHTMIPGVVAMHVETLEAVHRESKRLPPIQKPKILKPTLLQGEEIIMDGLRVYLLPDGREEGTGGNMGGPSLLPAEGAAFLTNYRIIFKGIPCDPLACEQVVVRYFPVSTMTKEKQIKLGYTPHIDQLPKEGIQIRSNIFQLMKLAFDEEVIPEDIDTFRKLSNKSRNPATVFQTFAFTGHVMIQPTPMHKHKEKNASLKNFAKKTLMKTARKAGIKPKQSSRKHKYVLPTETMQRRSMSPRSSGGSDSDSERPNSEMFDDLSIVDELEYASSLTTDPKTIEKLLQRPGYHDYERLGLNSLSTSHHSSEPKSEQFRVSTVNANFSVCRSYPALLVVPLSVTDDSITKLARTHRQYRFPVITWRHSRTKALLIRASGFHTRGLMGMLKHDTTSVFTDTVTLAHLLLLLESLLSVMSFFVFPFLSFTLNKSMPEPETTMDEGETETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNASDALDKIRYESLTDPSKLDSGKDLEIRIIPDKNNNTLTIIDTGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLIADKVIVQTKHNDDEEYIWESAAGGSFTVRTATGDEPIGRGTKITLYIKEDQAEYIEEKRIKEVVKKHSQFIGYPIKLLVEKERDKEVSDDEEDEKKEDEDEEKKDDKPKVEDLEEDDDEDKNKDKKKKKKIKEKYTEDEELNKTKPIWTRNPDDITKEDYGEFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFVPKRAPFDMFENKKKKNNIKLYVRRVFIMDNCEDLIPEYLNFVKGVVDSEDLPLNISREMLQQSKILKVIRKNLVKKCLELFDDIAENKDDYKKFYEHFSKNLKLGIHEDSTNRKKIAEYMRFYTSSSGEEMASLKEYVSRMKENQKVIYYITGESREVVQSSAFVERLRKSGLEVIYMVDPIDEYAVQQLKEYDGKNLVSVTKEGLELPEDEAEKKKFEEDKAAFEGLCKIMKDILDKKVEKVTVSNRLVISPCCIVTSQYGWSANMERIMKAQALRDTSTMGYMAAKKHLEINPDHAIIKSLKEKSDADKNDKAVKDLVLLLYETSLLASGFSLEEPGLHANRIHRMIKLGLGIDEEDAPVETTTTEEMPPLEGDEDDASRMEEVD

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00183	HSP90	Hsp90 protein	Family	Interproscan
PF02141	DENN	DENN (AEX-3) domain	Family	Interproscan
PF02518	HATPase_c	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase	Domain	Interproscan
PF02893	GRAM	GRAM domain	Domain	Interproscan
PF03456	uDENN	uDENN domain	Domain	Interproscan
PF06602	Myotub-related	Myotubularin-like phosphatase domain	Domain	Interproscan
PF12335	SBF2	Myotubularin protein	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001194	Domain	cDENN domain	Interproscan
IPR001404	Family	Heat shock protein Hsp90 family	Interproscan
IPR003594	Domain	Histidine kinase/HSP90-like ATPase	Interproscan
IPR004182	Domain	GRAM domain	Interproscan
IPR005112	Domain	dDENN domain	Interproscan
IPR005113	Domain	uDENN domain	Interproscan
IPR010569	Domain	Myotubularin-like, phosphatase domain	Interproscan
IPR019805	Conserved_site	Heat shock protein Hsp90, conserved site	Interproscan
IPR020568	Homologous_superfamily	Ribosomal protein uS5 domain 2-type superfamily	Interproscan
IPR020575	Domain	Heat shock protein Hsp90, N-terminal	Interproscan
IPR022096	Domain	SBF1/SBF2 domain	Interproscan
IPR029021	Homologous_superfamily	Protein-tyrosine phosphatase-like	Interproscan
IPR036890	Homologous_superfamily	Histidine kinase/HSP90-like ATPase superfamily	Interproscan
IPR037196	Homologous_superfamily	HSP90, C-terminal domain	Interproscan
IPR037516	Domain	Tripartite DENN domain	Interproscan
IPR043153	Homologous_superfamily	DENN domain, C-terminal lobe	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11528	HEAT SHOCK PROTEIN 90 FAMILY MEMBER	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0005829	Cellular Component	cytosol	Interproscan
GO:0005886	Cellular Component	plasma membrane	Interproscan
GO:0006457	Biological Process	protein folding	Interproscan
GO:0016887	Molecular Function	ATP hydrolysis activity	Interproscan
GO:0032991	Cellular Component	protein-containing complex	Interproscan
GO:0034605	Biological Process	cellular response to heat	Interproscan
GO:0048471	Cellular Component	perinuclear region of cytoplasm	Interproscan
GO:0050821	Biological Process	protein stabilization	Interproscan
GO:0051082	Molecular Function	unfolded protein binding	Interproscan
GO:0097718	Molecular Function	disordered domain specific binding	Interproscan
GO:0140662	Molecular Function	ATP-dependent protein folding chaperone	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K18061	SBF1_2, MTMR5_13; myotubularin-related protein 5/13	-	Protein phosphatases and associated proteins	ko01009	PMID: 28812709

Expression pattern

1. Expression trend for Bpl_scaf_49180-1.5 global RNA-seq network