Gene detail

Detailed information of Bpl_scaf_48840-2.24 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_48840-2.24	PLEXIN	Bpl_scaf_48840	249256	303892	+

Gene Structure

More details in Jbrowse Sequence

CDS

Bpl_scaf_48840-2.24

ATGACAGGATACCCTATACTGATTAAAGAGAAAGAACATCCAATCAACTTCACCCTCAATCTACTTAAATTCGAAAACATTAATGAAAACACAGAGAGCATGTTTATGTGCGAAGTTACCATACAAAACAAGACTGCTCAGTCATTGGGGGTACAATTCAGTGACACCATGGATTCAGCAGCTTGTATTGGACTACAGCTAAATGCTACACAGGAACATGGACCAACACAGTACAGGATCCGATTGAAATTTATGACATCTTATGTTGACAATGAGGTGCTCCCTACCAGTGGTCCAATAAATGGCGGTACCCTTGTTACAATAACAGGACATAATATTGGAAGCGAAATTGATAATATTTCTGTTACTATTGATGGGGTAGATTGTACCGATGTTGATGTTCTAAACGTATATAGACAAATCACTTGCAAGACTGGTAAAAAAGACAATTCCAGTGGTTATAAAAATATAATCAGTTTATCTGTGAATGGTATGAAATCAAGCTATCACGTTCCATTCATTTATAAGAAACCTACACTGACAGATTTCCGCCCTAATAAAGGGATAGCTGCAGGAAATACAACAATAACGATAACTGGCACAAACATTACTTTTGAAGGAACACATCGGTACTATGTTGCGTTTTGTAATGGCACGACGTGCATAGAGTGTAGTCTTTTTGACAACAACACAAAAGAGGGTAAAATCGCGTGTAAGACTGGAAATGTCACGGCACCCCAGGAAATGAACATACTACATGTTCGTATTGATGAATTGACAAATCTAACTCTTAATAAATCATTTCGTTACTTCCCTGATCCTTCTGGTATCAACTTGTCCAATGGAACTACAGATGTTATTAACAGTGGAGGATCTAAAATCACAATAAATGGTGAAGGTTTCTCAAATGTTGGTTCAGTTACTGTAGATGATGTGGATGAGCCATGTGACGTTCCGACAGATACCACAGTAGTTTGTGAAACACCAAGAAAAAAACCAACAGAGGACCGGAACCAGACTATCCGTGTTCACTTCGATGGGTTAACAGTAGAAATTAACATTAAAGTTGGCAGTATTAGGAAGTACATTGGCGATCTTAATTATAAAGTGGAAGTAGAAATATTAGCCATCGTTGTGGGTGTTCTGTCCTCCGCCCTTGTTATAGCTGTAGTAGTTGGTCTGTTAGCAGTATTAATACTCAAGAAGAAGAAAAAGAAAGCTATCAAAGAATTCAAACTAGAACTGATAACAGATGACAGAAAATCTACCATACAAAGCGCCATGGATAAGTTGGACAAGCTTTTAACAAATAAGCTTTTTCTCAAGTCTTTAGTTCAAACACTGGACAGACAATATAAGTTGACAATACAAGAAAAAGCACATTTTGCTTCCGTACTCTCTATTGCTCTCCTTGGAAACATGAGGCTTTTTTATGATCTTATTTCTTGCTTGTTGAATGACATGATAGAATCATCATCAAAGAAACAACAGAAAGTACTATTCAGGAGATTTGAATCTATTACTCAAAGACTAACAGCAAACTGGCTACAACTGACTCTATATGAACAGCTCAAGTCTCAAATTGGTATACCGCTGTTTATGTTGTACAAAGCCGTACAGACCATCACAGAGAAGGCTCCAATAGATGCTATAACTGGTAACTCAAAGAATACATTGGCTGAGGAAAAACTCTTGAAAATGAGAATCGAATACGAAACCCTGGAATCACCACCACAGAAGCTGTTGTTTCATAAGGATATACCGCGGTATAGAAATCTAATTGCTCCTGTTTTTAAACTTGTGGAGTCCGTTTCAGATCAAGAGTTTTGGAGTGCAATGGAGGAACTTTCACAATACCAGAAGCAAGAGTTAGGATTCAGTAGACAGGCAACACTGTGCATGATATATAATCTGTTTATTGGTAAATACAAACGTGAGATTATTGATGGCTTCCAGGAGACGGAAGCCAGTAACGATCTAGAATTTGCCAATAAGTTGGAGGAGATTATAGAATTAATGGAGGAACCATGA

Transcript

Bpl_scaf_48840-2.24

TATATTTTGTTGTCATGTGGTGTTCGCATCATTCGTGTTTTTATGTTTTGCTAAGAGAGCTTATTTTTCATCGGAATTATTGTGACAAACAGAACCGTTATCTGGTTTTACATTTGCATTCTATGAGTGCCCCGGTTTGTAAGGATTGTAATAGAGAACATTTAAATCATTTATGTTTTATGCGATTATGATATATCCGTTTCAAATTCCAGCTTGACTTTTCTTGTAGGAGTTCCATTTTAGCGTCACACTTCCACCCAAAGTCAGATATGCTACTGAAGATAAATCATTGACTTGCCATATAAGCAATAGCAATGGAACTGTGAAGAACGATGTTTCTAACTGTGGTATTAATCTCGATAGACCCAAATTGGATCCTGGAAGACACACATTTACTTTAAAACTTGACGGTGTAATTCTTGCTGAGGAGAGTATTATATTGTATAGGTGTACACAGTTTAACACTTGTAAAGATTGTACCAGCAGACCTAATTGTAGATGGAATTGGAAGTGTAGTAACGTCGGTAAAATAAATACCGAAGACAACTGTCCTACGTTAAATATGACAGGATACCCTATACTGATTAAAGAGAAAGAACATCCAATCAACTTCACCCTCAATCTACTTAAATTCGAAAACATTAATGAAAACACAGAGAGCATGTTTATGTGCGAAGTTACCATACAAAACAAGACTGCTCAGTCATTGGGGGTACAATTCAGTGACACCATGGATTCAGCAGCTTGTATTGGACTACAGCTAAATGCTACACAGGAACATGGACCAACACAGTACAGGATCCGATTGAAATTTATGACATCTTATGTTGACAATGAGGTGCTCCCTACCAGTGGTCCAATAAATGGCGGTACCCTTGTTACAATAACAGGACATAATATTGGAAGCGAAATTGATAATATTTCTGTTACTATTGATGGGGTAGATTGTACCGATGTTGATGTTCTAAACGTATATAGACAAATCACTTGCAAGACTGGTAAAAAAGACAATTCCAGTGGTTATAAAAATATAATCAGTTTATCTGTGAATGGTATGAAATCAAGCTATCACGTTCCATTCATTTATAAGAAACCTACACTGACAGATTTCCGCCCTAATAAAGGGATAGCTGCAGGAAATACAACAATAACGATAACTGGCACAAACATTACTTTTGAAGGAACACATCGGTACTATGTTGCGTTTTGTAATGGCACGACGTGCATAGAGTGTAGTCTTTTTGACAACAACACAAAAGAGGGTAAAATCGCGTGTAAGACTGGAAATGTCACGGCACCCCAGGAAATGAACATACTACATGTTCGTATTGATGAATTGACAAATCTAACTCTTAATAAATCATTTCGTTACTTCCCTGATCCTTCTGGTATCAACTTGTCCAATGGAACTACAGATGTTATTAACAGTGGAGGATCTAAAATCACAATAAATGGTGAAGGTTTCTCAAATGTTGGTTCAGTTACTGTAGATGATGTGGATGAGCCATGTGACGTTCCGACAGATACCACAGTAGTTTGTGAAACACCAAGAAAAAAACCAACAGAGGACCGGAACCAGACTATCCGTGTTCACTTCGATGGGTTAACAGTAGAAATTAACATTAAAGTTGGCAGTATTAGGAAGTACATTGGCGATCTTAATTATAAAGTGGAAGTAGAAATATTAGCCATCGTTGTGGGTGTTCTGTCCTCCGCCCTTGTTATAGCTGTAGTAGTTGGTCTGTTAGCAGTATTAATACTCAAGAAGAAGAAAAAGAAAGCTATCAAAGAATTCAAACTAGAACTGATAACAGATGACAGAAAATCTACCATACAAAGCGCCATGGATAAGTTGGACAAGCTTTTAACAAATAAGCTTTTTCTCAAGTCTTTAGTTCAAACACTGGACAGACAATATAAGTTGACAATACAAGAAAAAGCACATTTTGCTTCCGTACTCTCTATTGCTCTCCTTGGAAACATGAGGCTTTTTTATGATCTTATTTCTTGCTTGTTGAATGACATGATAGAATCATCATCAAAGAAACAACAGAAAGTACTATTCAGGAGATTTGAATCTATTACTCAAAGACTAACAGCAAACTGGCTACAACTGACTCTATATGAACAGCTCAAGTCTCAAATTGGTATACCGCTGTTTATGTTGTACAAAGCCGTACAGACCATCACAGAGAAGGCTCCAATAGATGCTATAACTGGTAACTCAAAGAATACATTGGCTGAGGAAAAACTCTTGAAAATGAGAATCGAATACGAAACCCTGGAATCACCACCACAGAAGCTGTTGTTTCATAAGGATATACCGCGGTATAGAAATCTAATTGCTCCTGTTTTTAAACTTGTGGAGTCCGTTTCAGATCAAGAGTTTTGGAGTGCAATGGAGGAACTTTCACAATACCAGAAGCAAGAGTTAGGATTCAGTAGACAGGCAACACTGTGCATGATATATAATCTGTTTATTGGTAAATACAAACGTGAGATTATTGATGGCTTCCAGGAGACGGAAGCCAGTAACGATCTAGAATTTGCCAATAAGTTGGAGGAGATTATAGAATTAATGGAGGAACCATGAACACATACATGAAATAGAAGAAAAAATCATCATTTTGTCTCATATTAACAGTTAATTTTAACATGCAAGTTATATTATGTTATCTAAAGTAAATAAATATTAACTAATGATCCGAAATTGATCATAAATGTATGCTTGTCACGTTAGTATGTGAAATTCTGTCTGTTTGTTCTGAATACTAACTAATATGTTGTAACAGAAATACTGATGCACTTAGGTTTAAACATCTATTAACCAACCCAATGTAAATATATCTGTATTCACTGTAACATTATTTACACCATATACGTACTGAGAATGGGCAATACACGATAGGAAAGATAGATCACTCCTTCGAAGCATCTGGTGTCAGTTACGTTTTATTTTGTAGGATATTTTTTGTTGATGTTATTTATGCTTCACTGTTGTTGTTTTGCCTATACTGTCTAACTGGTGTGTAATCTTTATCTTTATGATATCCAACAATCTACACCTGAATCAGACTAATCCATATACATGTAATTATATTGTGAATTAATATAATCCTTTATATTCAACTCAGAAATTTCACGAAGCCCGAATGATTGGCTTTCTTAGCTTTTGTCGTGCTTTACCCTGTTTCACCTTCGTGTGTGTACTGTTTTAATCCGGGTTGTTCTTTTGGTCGAAAATCTAGTGATTAGAGTACAATGTGTCTTTTCTTATTTCATTTTTATGTCTATATATGTTTTATGTAGATAACTTCTAATCCTCATTTTGCCAATTTCTATAAAAAATGACGACCTCTTCAACTTGTATATACACGAGTAACTTTGTCTAGTAGCACACGATTCCTTGTAAATATTTAACAGTAACACAAACGAGATACTCATGTCTAATATGTATATTCATCCTTTCCAGTAGGTGTCATAAAATGCTTCATTTATGAAAATAACATTTAAATAACCATGGCCATCAATTCCACTAATATCAACAAAACGAACAATCACCT

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01833	TIG	IPT/TIG domain	Domain	Interproscan
PF08337	Plexin_cytopl	Plexin cytoplasmic RasGAP domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002909	Domain	IPT domain	Interproscan
IPR008936	Homologous_superfamily	Rho GTPase activation protein	Interproscan
IPR013548	Domain	Plexin, cytoplasmic RasGAP domain	Interproscan
IPR013783	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR014756	Homologous_superfamily	Immunoglobulin E-set	Interproscan
IPR031148	Family	Plexin family	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22625	PLEXIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0002116	Cellular Component	semaphorin receptor complex	Interproscan
GO:0005887	Cellular Component	plasma membrane	Interproscan
GO:0017154	Molecular Function	semaphorin receptor activity	Interproscan
GO:0030334	Biological Process	regulation of cell migration	Interproscan
GO:0071526	Biological Process	semaphorin-plexin signaling pathway	Interproscan
GO:1902287	Biological Process	semaphorin-plexin signaling pathway involved in axon guidance	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for Bpl_scaf_48840-2.24 global RNA-seq network