Detailed information of Bpl_scaf_48789-6.9 in Gigantidas platifrons Gene info
Gene IDAnnotationScaffoldStartEndStrand
Bpl_scaf_48789-6.9MATRIN 3/NUCLEAR PROTEIN 220-RELATEDBpl_scaf_48789584859619697-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
--

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00076RRM_1RNA recognition motifDomainInterproscan
PF11835RRM_8RRM-like domainDomainInterproscan
PF13893RRM_5RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)DomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000504DomainRNA recognition motif domainInterproscan
IPR012677Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR021790DomainPTBP1-like, RNA recognition motif 2Interproscan
IPR035979Homologous_superfamilyRNA-binding domain superfamilyInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR15592MATRIN 3/NUCLEAR PROTEIN 220-RELATEDInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0003729Molecular FunctionmRNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0043484Biological Processregulation of RNA splicingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K13159HNRNPL; heterogeneous nuclear ribonucleoprotein L-Spliceosomeko03041PMID: 28812709

Expression pattern
 1. Expression trend for Bpl_scaf_48789-6.9 global RNA-seq network
TOP