Gene detail

Detailed information of Bpl_scaf_48262-0.27 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_48262-0.27	TUBULIN POLYGLUTAMYLASE	Bpl_scaf_48262	25380	59967	+

Gene Structure

More details in Jbrowse Sequence

CDS

Bpl_scaf_48262-0.27

ATGAATAGGAAGGACCCGGAGGATGTCTCCGATGGAGAAAACATACAAGTGTATGATGATAGTAGTAGTAGCTCTAGTGATGACAGCGATGGAGAGGAGGGGGAGGACTCAGGGTATGATAATGGTGGACAGCAGGCCTTATCCTTGATGGATGGAGCCTCTATACTTATCCAACAAGCACCAGAAGATGAAGAGGACGAAGGTGAAGCAGACATAGACACAGGTATAAGTACACAAGCTGATACAGAGGCTGAAGCTGATGTAGATAAGGATAAACAACTTGACGAGGAACGCAAAGATTTAGACAAAAAAGTGAAAAAGAAAAAGAAAAGAAAGAAAATTTACTACATATGTCTAACAAACTGCAAATATGAAGTCGTTCGGAAAATGTCAAAGAGGTTTGGCTTCAAGGAAGTTTCAGACGATGACGAATGGAGTTTATACTGGACGGATTACTCAGTGGCTTTGGAGAGAGTCATGGAAATGAAAAAATATCAGAAAATCAATCATTTTCCTGGTATGAGCGAGATTTGTCGGAAAGACATGTTAGCTAGGAACCTAAACAGGATGTTAAAGATGTATCCTAAAGAATATAATATCTTCCCCAAAACTTGGTGCCTTCCAGCAGACTATGGAGATTTTCAAGCCTACACTAGACAAAAGAAAAATAAAACTTATATACTGAAACCTGAGACAGGATGTCAGGGGAAGGGAATCTGGGATAATGTTTTCATGCATTTAACAAATTATGCCATTAATAAACACAGTCAAGACTTCATTAGAGATGACGAAGCAGGAAGTAAAAGGAGAATTAGTACTATTAATAGATATTTGAAGGATAAAGGATATGATATTGACAAAATGTGGTTAGAAATTGACGATGTTGTGATAAAAACATTAATTTCTGCTCATTCTATACTCAAACACAACTACCGCACATGCTTTCCTAATCATGTCAAAGGCAGCGCTTGTTTTGAAATCTTAGGATTTGACATACTGCTGGACAGGAAGCTACGACCTCAAATTTTAGAGGTCAATCATTCACCCAGTTTTAACACAGATTCAGAACTGGATAGAGAAATTAAAGGTGCTTTAGTTATGGACACTTTAAATTTAGTCAATTTTGGTGCTTGTGATAGAAGAAAGTGTATAGAAGAAGAGAAAAGAAGAATAAAAGACAGACTAATGGGGAGGGGAACAAAGAAAGAATCAAAAGAAGAGTTAGAACTAGCCCAGGCACAATATCAAGAGTATGTAGAGAGATATGAGAACAATCATATGGGTAACTTTAGAAGAATATATCCCTGTGCAGGCTTTGAGAAATATGATAAATTCTTTCATAGTAGTGGTACATTGTTTCAAGAAACTGCAGCTTTTAAAGCCAGAAGTGAAATGGCAAGGCAGCAACGTGATGAAATAGCCAGGAAGAAAGAGAAGTTGGAATCTATGTTAAAGGGCAAAAAGAGTCAGGCATCTGTGAGGCCTGAAAGCCCTAACAGTAGAAGACGACGGTCACTGAAAAGGACCACCATGCCGTCACGACGACTCTCAGGATCAAGAAATAGTTCTGATACTCTAGGTAGTGATTCAGACAGACGGTTATTTGATGAACCAGTGGATACTAGTAAACCTATGGACATCTTAGAAGAAGAAGAACTAGAGAGAATTAGTGGCTTATTACAGAGAGACAACCTTGTCAGAGGACTAGGTATCGTAGAACATGTATACCGCCTTCTTCATTGTACGCCAGGAACCATGGGAGTCATGAAGACGGATTCTCGACCTTTACCTCCGCCATTGGAAAACCACAGATGGCTCTGTGCCAATCGACAAAATGAGTCGTGCCTAGCCGGACGACAAGCCCCCATCAGAATTAAAGATCGTCAGTATTACAAAAAGCTCTTGGATCGTTACTTTGGACATAACCATGCTTTGGCCAATGAAAACAATACATCTAAGACTGAAAAGAATATGGGTAGATCTGGTCACAATCGATGTGCTTCAAATTATGATAGTGGTGTGTTCTTTCACACAAGAGAGGACCCCAACAGGCAGTTTCCACAGGTGCGTCTGTCTTATAGCACCAATGATAGGAAAGTTGTTTTAACACACCAGCCCTTCACTCAAGATGATATTGAAAATGAAGAGCTGTTTGATTTGGAGAGTGACCGTGAAGCGGATCTAACTCATAGGAATATTCGACACAACCACCCTCATCAAATTCATTCTTTATCATCTGCACTCACCAACTCAATGCATACCCTTTCTACTAATGACAATAATAATTCTATATCATCTATCAATCAGCCTAGTTACCAGTCTGCACGATGTACGACATGGCAGGCCAAATCTGGAAGTCTTAGTAACCTAAACGAGAAGACAAGAAACAAGTTTGTTAAGAAACCTTTAGGAGGAAATCCTAGAACAAACTCTGGTGCATTAGTGATACAGGAATCTGAGTTTCGAAGCAACCTGTCACATTTGTTAGACACAGAAGCTGAGAGGAATAGAATACTGGCCAGAAATGGTTATTCTTCTGATTGGAGGTCAGATGCAGCCACACCCAACAGTAAAAGAACTTTAAGTGCCCAAGGGCAAAGGAAAGACGGAGACCTACCAAGAGTCGCACCCAATAATGGTCCGCCGGGTCTATCAGTGGTCTCGGCCCCTGCACCAGTAATCCAGAGACCTGATTTAGGACATCCTGGATCGGCCACACCTGGAAGTAACATTAGCCGAATGGGATCTCAACAGTCTGTACCAATAAGTGAGCCTGCTTCTCTTAGGTCTACCAAGTCACAACGCATTAGAGGAGCTTCAAATAATCTGAGACTTCGTCAAATAGAACTGAGGGAAAATCATACAGCAGTATTAAGCTGA

Transcript

Bpl_scaf_48262-0.27

AAACGATCTTAATCTCCATAAAATAAATAAGTATGTTCACAATATTTTTTTTTCAGGATAACATCAGCTGTCTGTCAGAATGAATAGGAAGGACCCGGAGGATGTCTCCGATGGAGAAAACATACAAGTGTATGATGATAGTAGTAGTAGCTCTAGTGATGACAGCGATGGAGAGGAGGGGGAGGACTCAGGGTATGATAATGGTGGACAGCAGGCCTTATCCTTGATGGATGGAGCCTCTATACTTATCCAACAAGCACCAGAAGATGAAGAGGACGAAGGTGAAGCAGACATAGACACAGGTATAAGTACACAAGCTGATACAGAGGCTGAAGCTGATGTAGATAAGGATAAACAACTTGACGAGGAACGCAAAGATTTAGACAAAAAAGTGAAAAAGAAAAAGAAAAGAAAGAAAATTTACTACATATGTCTAACAAACTGCAAATATGAAGTCGTTCGGAAAATGTCAAAGAGGTTTGGCTTCAAGGAAGTTTCAGACGATGACGAATGGAGTTTATACTGGACGGATTACTCAGTGGCTTTGGAGAGAGTCATGGAAATGAAAAAATATCAGAAAATCAATCATTTTCCTGGTATGAGCGAGATTTGTCGGAAAGACATGTTAGCTAGGAACCTAAACAGGATGTTAAAGATGTATCCTAAAGAATATAATATCTTCCCCAAAACTTGGTGCCTTCCAGCAGACTATGGAGATTTTCAAGCCTACACTAGACAAAAGAAAAATAAAACTTATATACTGAAACCTGAGACAGGATGTCAGGGGAAGGGAATCTGGGATAATGTTTTCATGCATTTAACAAATTATGCCATTAATAAACACAGTCAAGACTTCATTAGAGATGACGAAGCAGGAAGTAAAAGGAGAATTAGTACTATTAATAGATATTTGAAGGATAAAGGATATGATATTGACAAAATGTGGTTAGAAATTGACGATGTTGTGATAAAAACATTAATTTCTGCTCATTCTATACTCAAACACAACTACCGCACATGCTTTCCTAATCATGTCAAAGGCAGCGCTTGTTTTGAAATCTTAGGATTTGACATACTGCTGGACAGGAAGCTACGACCTCAAATTTTAGAGGTCAATCATTCACCCAGTTTTAACACAGATTCAGAACTGGATAGAGAAATTAAAGGTGCTTTAGTTATGGACACTTTAAATTTAGTCAATTTTGGTGCTTGTGATAGAAGAAAGTGTATAGAAGAAGAGAAAAGAAGAATAAAAGACAGACTAATGGGGAGGGGAACAAAGAAAGAATCAAAAGAAGAGTTAGAACTAGCCCAGGCACAATATCAAGAGTATGTAGAGAGATATGAGAACAATCATATGGGTAACTTTAGAAGAATATATCCCTGTGCAGGCTTTGAGAAATATGATAAATTCTTTCATAGTAGTGGTACATTGTTTCAAGAAACTGCAGCTTTTAAAGCCAGAAGTGAAATGGCAAGGCAGCAACGTGATGAAATAGCCAGGAAGAAAGAGAAGTTGGAATCTATGTTAAAGGGCAAAAAGAGTCAGGCATCTGTGAGGCCTGAAAGCCCTAACAGTAGAAGACGACGGTCACTGAAAAGGACCACCATGCCGTCACGACGACTCTCAGGATCAAGAAATAGTTCTGATACTCTAGGTAGTGATTCAGACAGACGGTTATTTGATGAACCAGTGGATACTAGTAAACCTATGGACATCTTAGAAGAAGAAGAACTAGAGAGAATTAGTGGCTTATTACAGAGAGACAACCTTGTCAGAGGACTAGGTATCGTAGAACATGTATACCGCCTTCTTCATTGTACGCCAGGAACCATGGGAGTCATGAAGACGGATTCTCGACCTTTACCTCCGCCATTGGAAAACCACAGATGGCTCTGTGCCAATCGACAAAATGAGTCGTGCCTAGCCGGACGACAAGCCCCCATCAGAATTAAAGATCGTCAGTATTACAAAAAGCTCTTGGATCGTTACTTTGGACATAACCATGCTTTGGCCAATGAAAACAATACATCTAAGACTGAAAAGAATATGGGTAGATCTGGTCACAATCGATGTGCTTCAAATTATGATAGTGGTGTGTTCTTTCACACAAGAGAGGACCCCAACAGGCAGTTTCCACAGGTGCGTCTGTCTTATAGCACCAATGATAGGAAAGTTGTTTTAACACACCAGCCCTTCACTCAAGATGATATTGAAAATGAAGAGCTGTTTGATTTGGAGAGTGACCGTGAAGCGGATCTAACTCATAGGAATATTCGACACAACCACCCTCATCAAATTCATTCTTTATCATCTGCACTCACCAACTCAATGCATACCCTTTCTACTAATGACAATAATAATTCTATATCATCTATCAATCAGCCTAGTTACCAGTCTGCACGATGTACGACATGGCAGGCCAAATCTGGAAGTCTTAGTAACCTAAACGAGAAGACAAGAAACAAGTTTGTTAAGAAACCTTTAGGAGGAAATCCTAGAACAAACTCTGGTGCATTAGTGATACAGGAATCTGAGTTTCGAAGCAACCTGTCACATTTGTTAGACACAGAAGCTGAGAGGAATAGAATACTGGCCAGAAATGGTTATTCTTCTGATTGGAGGTCAGATGCAGCCACACCCAACAGTAAAAGAACTTTAAGTGCCCAAGGGCAAAGGAAAGACGGAGACCTACCAAGAGTCGCACCCAATAATGGTCCGCCGGGTCTATCAGTGGTCTCGGCCCCTGCACCAGTAATCCAGAGACCTGATTTAGGACATCCTGGATCGGCCACACCTGGAAGTAACATTAGCCGAATGGGATCTCAACAGTCTGTACCAATAAGTGAGCCTGCTTCTCTTAGGTCTACCAAGTCACAACGCATTAGAGGAGCTTCAAATAATCTGAGACTTCGTCAAATAGAACTGAGGGAAAATCATACAGCAGTATTAAGCTGACAGATATAAAACTATGAGAAAAGTCGTCATTATAAAGTCATCAGTCCCAGAACATGCACAGAAACTGTTTACAGATTACTGATATATAGTTGATATTTAGGAATGCTGGGTGCAAAGCAATGTTTAGAC

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03133	TTL	Tubulin-tyrosine ligase family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR004344	Family	Tubulin-tyrosine ligase/Tubulin polyglutamylase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12241	TUBULIN POLYGLUTAMYLASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000226	Biological Process	microtubule cytoskeleton organization	Interproscan
GO:0005929	Cellular Component	cilium	Interproscan
GO:0015631	Molecular Function	tubulin binding	Interproscan
GO:0018095	Biological Process	protein polyglutamylation	Interproscan
GO:0036211	Biological Process	protein modification process	Interproscan
GO:0070740	Molecular Function	tubulin-glutamic acid ligase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K16582	TTLL6_13; tubulin polyglutamylase TTLL6/13	EC:6.3.2.61	Cilium and associated proteins	ko03037	PMID: 28812709

Expression pattern

1. Expression trend for Bpl_scaf_48262-0.27 global RNA-seq network