| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_48198-2.4 | RETINOBLASTOMA-BINDING PROTEIN 6 | Bpl_scaf_48198 | 240112 | 244504 | + |
| CDS | |||||
| Bpl_scaf_48198-2.4 | |||||
| Transcript |
| Bpl_scaf_48198-2.4 |
| Protein |
| Bpl_scaf_48198-2.4 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | ULD|UFD|DWNN |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF08783 | DWNN | DWNN domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR014891 | Domain | DWNN domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR15439 | RETINOBLASTOMA-BINDING PROTEIN 6 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005634 | Cellular Component | nucleus | Interproscan |
| GO:0006511 | Biological Process | ubiquitin-dependent protein catabolic process | Interproscan |
| GO:0008270 | Molecular Function | zinc ion binding | Interproscan |
| GO:0016567 | Biological Process | protein ubiquitination | Interproscan |
| GO:0061630 | Molecular Function | ubiquitin protein ligase activity | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K10624 | RBBP6; E3 ubiquitin-protein ligase RBBP6 | EC:2.3.2.27 | Ubiquitin system | ko04121 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_48198-2.4 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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